| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3130 |
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| Symbol | |
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| ID | 4280033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3746458 |
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| End bp | 3747411 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638135949 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_751806 |
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| Protein GI | 114564292 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.849943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAACA AATGTATTAT CACTACGTTA CTTTGTGGGA TATTCGCTTT CGCGTGCTTA
TCTCTCTCAG TTCAGGCGGC CCCCTGGAAT CAACTCACTG GTGAACAACT AGAACAGCAA
CTGACGGAGA AATTTGCTCA AGGTAATTAC TCTAACAAAG GTGCCGACTC TTGCCTGATG
TGTCATAAGA AAAATGACAA GGTCATGGCG ATATTCGATA GCGTGCACGG TAGCCCGAGC
CAACAGGGTT CGCCTATGGC GGGTCTGCAA TGCGAAGCCT GTCATGGCCC GTTAGGTGCG
CATAACAAAG GCGGTAAGGA GCCGATGATC GCCTTTGGCA AAGAGAGCAA GCTTTCCGCT
CAAAGTCAGA ACAGTGTCTG CCTAGGTTGC CATAACGATC CTAAGCAGAT GGCATGGCAT
AGCAGCAGCC ACAATTTAGA CGAGGTGGCC TGCAGCGATT GTCATAATAT CCACACCGAC
AACGATCCGG TTATGGACAA GCTTACGGTT AATGACACCT GTACCTCTTG CCACACGCAG
CAAAAATCTG ACATGAATAA GCGCTCATCT CACCCGATGA AGTGGGATCA AATGACCTGT
ATCGATTGTC ATAATCCACA CGGTTCTATG AGTGAAAGTG CGCTGAATCA CGCCACGGTG
AATGACACTT GTTATAGCTG TCATGGCGAA AAACGTGGCC CTGTTTTATG GGAGCATGCG
CCAGTGACAG AAAATTGTGC CAACTGTCAT AACCCCCATG GCAGCGTTAA CGAAGCCATG
CTCACCCAAA GAGCACCACA ACTGTGTCAG CAATGTCATA TGGATGATGG TCATGCAAGC
CGTGTTGTAC AACAAAGCGG AAGTGATGCG TTTGGCGGCG GTAAGAGTTG CCTCAATTGT
CATAGCCAGA TCCATGGCTC CAATCACCCA GCCGGCAGCA AGCTGCAGCG CTAA
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| Protein sequence | MMNKCIITTL LCGIFAFACL SLSVQAAPWN QLTGEQLEQQ LTEKFAQGNY SNKGADSCLM
CHKKNDKVMA IFDSVHGSPS QQGSPMAGLQ CEACHGPLGA HNKGGKEPMI AFGKESKLSA
QSQNSVCLGC HNDPKQMAWH SSSHNLDEVA CSDCHNIHTD NDPVMDKLTV NDTCTSCHTQ
QKSDMNKRSS HPMKWDQMTC IDCHNPHGSM SESALNHATV NDTCYSCHGE KRGPVLWEHA
PVTENCANCH NPHGSVNEAM LTQRAPQLCQ QCHMDDGHAS RVVQQSGSDA FGGGKSCLNC
HSQIHGSNHP AGSKLQR
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