Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3117 |
Symbol | |
ID | 4280020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3728931 |
End bp | 3729557 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135936 |
Product | hypothetical protein |
Protein accession | YP_751793 |
Protein GI | 114564279 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3531] Predicted protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.149179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTG AGCTTTATTT TATCTACGAC TCACATTGCC CTTGGAGCTA TGCCACCACA CCGTTGGTGA ATGCATTGCA GCAAGCCTAT CCTGAAATGA ATGTACATTT ACTGCATAGC GCACATTACA TTGGCAAAGA CAGTGCTGGC GAAGAGCAAA TGGAAGCGGC TGCAAGAATG AGTGGACTAA AATTTGGCCG CGATCATATT CGTTACGTAA ACAGTCCTAA AAGCTCAATC AAAACCGCAA ACTTTATGGC CTGGTTGCAG GGCAAACAAG CTGACAAGCA ATTAGATGTG CTCAATGCGC TACAAAGAGC TCATTTCATT GAAGGCAACC CACTTAGCAA TAAGCACGAC TTTAATGACA TCGTAGAAAA ATTTAAGCTG TCACCATCAA ATAAAGTGTT TAAAGATGAG CTCAGTATGG ACGCAGAATA CGTACTGGAA GGCATAGAAG AGATCCAACA AGTCATTGGT ACTACCGGCT TCCCCGTTTT AGTCATGACC GTTAATGATA ACGCCATTTT TATCGATCAT TCACAATATC TGAGTAGCCC TCATGCTGTG GTTGCTGCGG TTGAAAAAGA AATAGCTGCG ATTAAACTCG CGAAAACGGA ATCGTAG
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Protein sequence | MTTELYFIYD SHCPWSYATT PLVNALQQAY PEMNVHLLHS AHYIGKDSAG EEQMEAAARM SGLKFGRDHI RYVNSPKSSI KTANFMAWLQ GKQADKQLDV LNALQRAHFI EGNPLSNKHD FNDIVEKFKL SPSNKVFKDE LSMDAEYVLE GIEEIQQVIG TTGFPVLVMT VNDNAIFIDH SQYLSSPHAV VAAVEKEIAA IKLAKTES
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