Gene Sfri_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3091 
Symbol 
ID4279994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3697343 
End bp3698005 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID638135910 
Producturacil-DNA glycosylase 
Protein accessionYP_751767 
Protein GI114564253 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTC ATTGGCAAGA GTTGTTTGAG CAACAACAAT CTCAGGAATA TTATCAACAT 
TTGCAACACT TTATAGCCTC TCAAAGGGCC GATAATAAAA CCGTTTATCC GCCTGATGAT 
GAAGTGTTTA CTGCTTTTGA TTTAACGCCG CTTTCGGAGG TTAAAGTCGT GATACTGGGG 
CAAGACCCTT ACCATGGGCC CAATCAAGCA CATGGGCTTT CTTTTTCGGT TAAAAAAGGC 
ATTAAACCGC CTCCATCATT AGCGAATATC TATAAAGAAT TAACGAATGA TATTGAAGGC 
TTTGTGACTC CCGAACATGG CAATTTAACC TCTTGGGCTG AGCAAGGTGT TTTACTATTA 
AATACGGTAC TGACGGTAGA GCAGGGGTTA GCTCATTCAC ATGCTAAATC TGGCTGGGAG 
ACATTCACTG ATAATGTATT GCTGCGATTA GACCAACAAC CTTCGCCGAT TATATTTGTG 
TGTTGGGGAA ATCATGCTAT CAAGAAAGGT CGTTTGATTA CGGCATCGCA TCATCATGTA 
TTGAACGGCC CGCATCCATC GCCATTATCT GCTTACCGAG GTTTTTTTGG TTGCGGTCAC 
TTTTCAAGTA TTAATCAATT ATTAATTGAA CAAGGCAACC TAGCCATAAA TTGGCAAGTT 
TGA
 
Protein sequence
MTSHWQELFE QQQSQEYYQH LQHFIASQRA DNKTVYPPDD EVFTAFDLTP LSEVKVVILG 
QDPYHGPNQA HGLSFSVKKG IKPPPSLANI YKELTNDIEG FVTPEHGNLT SWAEQGVLLL 
NTVLTVEQGL AHSHAKSGWE TFTDNVLLRL DQQPSPIIFV CWGNHAIKKG RLITASHHHV 
LNGPHPSPLS AYRGFFGCGH FSSINQLLIE QGNLAINWQV