| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3013 |
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| Symbol | |
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| ID | 4279917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3618887 |
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| End bp | 3619435 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135833 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_751690 |
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| Protein GI | 114564176 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATATTG GTACAAGCCT AAAAGCTGTT CGTAAATTGA AAGGATTATC TCAACGTGAG
TTAGCCAAGC GTGCAGGGGT TACCAACAGT ACAATTTCAA TGATTGAGAA AAATAGTGTT
AGCCCATCAG TGAGTTCACT TAAAAAGGTA CTCGCAGGGA TCCCGATGTC CTTAGTCGAT
TTTTTCTCTA TTGATGATGG CTCTATCGGT GACCAAAAAG TGGTTTATCG AGGTAATGAG
TTACTGGACA TCGGTACTGG CGAATTAGTC TACAAGCTTA TTGGTCGTGA TTACCCAAAC
CGTGCGATGT CGGTAATGAG TGAAACATAT CCTGTCAATG CTGATACTGG CGCTGAAATG
CTGCAACATA AGGGTGAGGA AGGTGGCATC ATTATAGAAG GCAAGCTTGA GCTTACTGTT
GGCGAAGAGG TTTTTATCCT CGAAAAAGGC GACAGTTACT ATTTTAATAG TGAACAACCT
CATCGATTTC GTAATCCATT TGATGAACCT TGCAAGCTCA CTAGCGCGAC TACGCCAGCT
GATTTTTAA
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| Protein sequence | MDIGTSLKAV RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LAGIPMSLVD
FFSIDDGSIG DQKVVYRGNE LLDIGTGELV YKLIGRDYPN RAMSVMSETY PVNADTGAEM
LQHKGEEGGI IIEGKLELTV GEEVFILEKG DSYYFNSEQP HRFRNPFDEP CKLTSATTPA
DF
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