Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3012 |
Symbol | |
ID | 4279916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3617678 |
End bp | 3618442 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135832 |
Product | peptidase C26 |
Protein accession | YP_751689 |
Protein GI | 114564175 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGT CAGGTCTTCC CCTCATCGGG GTAGTAGCGT GCAATCAGCA AATTGGTCTT CATCCATTTA ACATAGTGGG TGAAAAATAT TTATTGAGTG TGGTTAATGG CGCTAAAGGA TTCCCCTTAG TTATCCCATC ACTTGGCGTC GATGCGCCAA TTGAAGCTAT TCTTGCTCGT CTCGACGGTA TCCTTTTTAC GGGTTCACCA TCGAATGTTG AACCTCATCA TTACCAAGGT CCTGCTAGTG AGCATGGAAC CCATCATGAT CCTAAGCGTG ACGCAATAAC TTTACCGCTG ATAAAAGCCG CAATTGATGC CGGGATCCCT GTATTAGGTA TTTGCCGTGG TTTTCAAGAA ATGAACGTAG TGTACGGTGG CAGTTTGTAC CAGAAACTAC ACGAAGTAGG CACGTATATT GAACATCGTG AAGATAAGAA AGCCCCATTA GATGTGCAAT ATGGTATTTC GCATCCAGTT AACCTGGTTG CTGGCGGGCT CCTTCACGAT GCATGGGGCT GTGACACAGC AGAGGTTAAC TCTGTTCATA CTCAAGGCGT GGAGCGTCTA GGTGAGGGGT TACAGCCAGA AGCATTCGCT CCAGACGGAT TAGTAGAAGC ATTTTCTGTT AAAAATGCTA AAAATTTTGC ATTAGGAGTC CAATGGCATC CAGAATGGAA AGTAACCGAA AATGCATTCT ACACTGCAAT TTTCGAAGCA TTCGGACAAG CCTGTAGACA ACATGCGGCA ACACAAGTGA GATAA
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Protein sequence | MSLSGLPLIG VVACNQQIGL HPFNIVGEKY LLSVVNGAKG FPLVIPSLGV DAPIEAILAR LDGILFTGSP SNVEPHHYQG PASEHGTHHD PKRDAITLPL IKAAIDAGIP VLGICRGFQE MNVVYGGSLY QKLHEVGTYI EHREDKKAPL DVQYGISHPV NLVAGGLLHD AWGCDTAEVN SVHTQGVERL GEGLQPEAFA PDGLVEAFSV KNAKNFALGV QWHPEWKVTE NAFYTAIFEA FGQACRQHAA TQVR
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