| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2988 |
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| Symbol | |
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| ID | 4279893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3588959 |
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| End bp | 3589759 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135808 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_751666 |
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| Protein GI | 114564152 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.22302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGT TTCAAGTTAT TCTGCTGGCA TTAATCCAAG GGCTTACGGA GTTTTTGCCT
ATTTCTAGCT CGGCACATTT AATTTTACCA TCACAAATAT TAGGTTGGGC AGATCAAGGT
TTATCATTTG ATGTGGCAGT TAATACAGGC TCTTTATTTG CCGTGGTCAT TTATTTTCGT
CATGAGATTG TGGTTCTGGC TAAAGCCTGG TTCACCAGCT TAGCTAGCAA GCAACAAACT
CAAGAAAGTA AACTCGCCTG GTGGATTATT TTAGCGACTA TCCCAGCTGT AATTGTAGGA
TTTACTGCCA AAGACTTTAT TGAAACCCAT TTCAGAAATA CTTTAGTGAT AGCGATAACC
ACGATTGTTT TTGGTTTATT GTTGTGGGCA GCAGATAGAA TGTCAAAAGC ACAGTTAACT
GAATTTCAAA TGGGTTGGAA AAAGGCTTTG CTTATCGGCT TAGCGCAGGC AATGGCATTA
ATACCTGGCA CGTCGCGCTC TGGCGCCACG ATGACAGCAG CACTGATGTT AGGGCTAACA
CGTGATGCAG CTGCTCGTTT TTCATTCCTT ATGTCTGTTC CTGTGAGCTT TGGTGCTGCG
TTACTGGTGA CAAAAGACTT GGTTAGCAGT CCAGCCCCTA TTGACTACCA AGCACTTGGT
TTAGGGATTG TTGTTTCATT CGTTGCTGCG TATTTATGTA TCCACTTCTT TTTAAAGTTT
ATTAGCAAAA TAGGCATGAC GCCGTTTGTA TTATATCGCC TTGCTCTTGG TGCGATATTG
CTTGGATTGC TCTATCTTTA A
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| Protein sequence | METFQVILLA LIQGLTEFLP ISSSAHLILP SQILGWADQG LSFDVAVNTG SLFAVVIYFR
HEIVVLAKAW FTSLASKQQT QESKLAWWII LATIPAVIVG FTAKDFIETH FRNTLVIAIT
TIVFGLLLWA ADRMSKAQLT EFQMGWKKAL LIGLAQAMAL IPGTSRSGAT MTAALMLGLT
RDAAARFSFL MSVPVSFGAA LLVTKDLVSS PAPIDYQALG LGIVVSFVAA YLCIHFFLKF
ISKIGMTPFV LYRLALGAIL LGLLYL
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