Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2987 |
Symbol | |
ID | 4279892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3588010 |
End bp | 3588852 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135807 |
Product | ribosomal RNA large subunit methyltransferase A, putative |
Protein accession | YP_751665 |
Protein GI | 114564151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.476596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAT CTTTATTATG TCCAGTGTGT TCAGCTCCAC TAAATCAACA TCAAGCTTCA GCGGGATTTT ATTGCGACAA CAAACATCAT TTTGATAAAC ACCCTAATGG TTACTGGCCA CTGCTGAGCA ACGTAAAAGG CAAGAGTAAG CCGAAAGTGG AGTCTCGCCA GCAAATGCGT GGGCGACATT TTTTATTAGA AACAGGTTTG TTTGCACCGT TAATTAAACA ACTTCAAGCT GTACTGCTGG ACTTATGTGC TTCTAATCGT GACGCAGAAT TACAGCATAT CGATTACCAA TGCGCTGATG GATATTATTT GCGTCAGCTT GTTCCTGCAC TAGTTGAAAC AAATGTATCG TGCCAGCACT GGGGCATTAC TGATGCTGAA AACGCAATAT TTGCAGCGGC AAAATCTGAA ACACCGGCGA ACTTATTGTT GTTGGCACTA AAAAAATTGC CCTTTGCCTC GCAATCAGTC GATATCGTGA CGGTTCTTGA TTCACCGTTA AAGGGGAAAG AATGCATTCG GATTTTAAAA GATGATGGTC GAATTGTATT GTTGCAGCCT GGTATTAGGC ATTTATGGCA AATTAAACAA CAAGTTTATC CAGACTTAGT CGAAAAACCG TTGCAGTTAA ATTTACCTAA TGATGTTGAA ATTGAGGCCC AGCAACAAGT GGTATTTACT CAATCTGTGA CCGGTGAGCA GGCATTAACA CTCCTTGATA TGTCGGTATT TGGTTGGCGT GCTAATGATC AGTTAAAGCA TCAAGTTAAA TCGACGGCAA TCAGTGAGTT AGAGTTTGAT TGGCAGATCA TAACGCTCAA AAAACGCTTA TAA
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Protein sequence | MTLSLLCPVC SAPLNQHQAS AGFYCDNKHH FDKHPNGYWP LLSNVKGKSK PKVESRQQMR GRHFLLETGL FAPLIKQLQA VLLDLCASNR DAELQHIDYQ CADGYYLRQL VPALVETNVS CQHWGITDAE NAIFAAAKSE TPANLLLLAL KKLPFASQSV DIVTVLDSPL KGKECIRILK DDGRIVLLQP GIRHLWQIKQ QVYPDLVEKP LQLNLPNDVE IEAQQQVVFT QSVTGEQALT LLDMSVFGWR ANDQLKHQVK STAISELEFD WQIITLKKRL
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