| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2979 |
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| Symbol | |
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| ID | 4279884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3578635 |
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| End bp | 3579654 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135799 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_751657 |
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| Protein GI | 114564143 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGT TCGAAGGTTC ACATATCCTT TCAGTAAACC AGTTAGATCT GGATTCGATT
AACACTATTT TCAACGTCGC TAACAAAATG ACCCCTTATG CTTTGCGTGA AAAACGCACC
AAAGTGTTGG AAGGTGCCAT TTTAGGCAAT CTGTTTTTTG AACCCAGCAC CCGAACTCGT
GTCAGCTTTG GCTGTGCCTT CAATTTACTT GGCGGACATG TAAGAGAAAC CACAGGAATG
GCATCATCGT CATTATCTAA AGGCGAGTCG CTTTACGATA CCGCCCGAGT GCTCTCGACC
TATTCTGATG TGATTGCTAT GCGTCATCCA GATGCCTACT CCGTCAAAGA GTTTGCTGAA
GGCAGCCGAG TGCCAGTAAT CAATGGCGGT GATGGGCCAA ATGAACATCC AACTCAAGCC
TTGCTGGACT TGTTTACCAT CAAAAAAGAA TTAAGCCATT CAGGTATGGG TATCGATGGT
ATGCACATTG CCATGGTGGG TGACTTAAAA TATGGTCGCA CCGTGCATTC ACTCTCGCGC
TTACTTTGTA TGCATAAGGA CATTAAGTTC ACATTGATAT CGCCAAGTGA GCTAGCAATG
CCTGACTATG TGATCGCCGA CATTGAAAAT GCTGGCCATA AGATCACAAT AACCGAACAA
CTTGAAGGTA ATTTACATAA TGCGGATATT TTATATCTTA CCCGTATTCA AGAAGAGCGC
TTTCCGTCAC AGGAAGAAGC CAATAAATAC CGTGGTAAGT TTCGCTTAAA TCACAATATT
TATACGCAGC ATTGCAAATC AAATACGGTG ATTATGCATC CATTACCTCG TGATTCACGC
GCGCAAGCAA ATGAACTCGA CAATGATTTA AACAGCCATC CAAGTTTGGC TATTTTTAGA
CAAGCCGACA ACGGCTTACT CATACGTATG GCACTTTTTG CATTAACATT GGGAGTTGCA
AACCAACTCG AAAAGTATGA GTGCCCAGTA AACTGGTATT CACGTAAAGC CGATAGATAA
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| Protein sequence | MTQFEGSHIL SVNQLDLDSI NTIFNVANKM TPYALREKRT KVLEGAILGN LFFEPSTRTR
VSFGCAFNLL GGHVRETTGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DAYSVKEFAE
GSRVPVINGG DGPNEHPTQA LLDLFTIKKE LSHSGMGIDG MHIAMVGDLK YGRTVHSLSR
LLCMHKDIKF TLISPSELAM PDYVIADIEN AGHKITITEQ LEGNLHNADI LYLTRIQEER
FPSQEEANKY RGKFRLNHNI YTQHCKSNTV IMHPLPRDSR AQANELDNDL NSHPSLAIFR
QADNGLLIRM ALFALTLGVA NQLEKYECPV NWYSRKADR
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