| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2959 |
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| Symbol | |
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| ID | 4279864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3556872 |
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| End bp | 3558131 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135779 |
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| Product | putative ABC transporter solute-binding protein |
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| Protein accession | YP_751637 |
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| Protein GI | 114564123 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATG CATCTAGCAA CGGTGTTGTA AATGTTGCAG ACAAGCCGTC AGCACGAATT
CAAACATCAA CATCAATCCG CGAGTCTGCT CAAACATCAC AAACATCATG GCCAGAGATT
CAATCTCGAG GCGCTAATCA AGATGTATAC TTTCATGCTT GGGGCGGCGA TCCGCAAATA
AATCGTTATA TTCAATGGGC CGCGAAGCAA GTTAAGCAGC AGTATCAAAT CAATTTACAC
CATGTAAAAC TCACCGACAC CAGCGAAGCG GTCAGCCGAG TATTGGCCGA AAAATCAGCA
AACAATGATC ATCAAGGTCA AGTCGATTTA GTGTGGATTA ACGGTGAAAA CTTTGCCGCC
ATGGCCAAAC ATCAGCTACT CGCACCAAAT TGGGTTGATC GATTACCCAA CTTTGGCTTA
ACCGACCCAG ACAATAATCC TGCGATGACC CGCGACTTTG GTGTGCCAAC ACAAGGGATG
GAAGCACCAT GGGGTAAAGC TGCGCTGACC TTTTACTACG ACAGCCTAGT GACCACATCA
CCACCACAAA CCTTGCAACA ATTAAGTCTA TGGGCCAAAC AACATCCAGG CCGATTTACC
TACCCTAAAC CGCCTGACTT TTTAGCCACC AGCTTTTTAA AGTACGCCTT AATTGTACTG
AACAACTCAC AGCCTGAAGC GATTAAAAAT CTTCTTTATC AACCCGCTAC AACACAAAGC
CAAGCTTTGC TATTACCAGT GCTTTGGCAA TATTTAGATG AACTACATCC GCATTTATGG
CGTAAAGGCC AACACTTTAT GTCTAGCGGC ATGGAGCTTC GCCGCTTAAT CGGCGATGGA
GAACTTGCTC TAGCGTTTAC CTTTTCAGCC GCTGAAATTC CCGCGGCCGT TGCACGTTTT
GAATTACCCG ACAGCAGCCG TAGTTATCGT ATGCAAGATG GCAGTTTGAG TAATATTCAC
TTTATCGCCA TTCCCTATAA TGCCGCTCAT CGAGACAGCG CTAAATTGGT AGTCAATTTT
TTACTCAGCC CACAAGCTCA AGCACACAAA CAGCAAGCGA ATATATGGGG CGACACCAGC
GTGTTAGCAT TATCAAAGCT GACTGCCGAA CAGCAGACTT GGTTTGAGCC ACCCGCTCAG
TCACATCCCA GTGCCACTAT TGCTAACCAA GCAATCAGCC CAGCGTTAAG CGAGCCAGAT
CCAAGTTGGA GTAAGGTTAT TACAAAGCTA TGGTTACAAC GCTATGGAGT GATGCAATGA
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| Protein sequence | MANASSNGVV NVADKPSARI QTSTSIRESA QTSQTSWPEI QSRGANQDVY FHAWGGDPQI
NRYIQWAAKQ VKQQYQINLH HVKLTDTSEA VSRVLAEKSA NNDHQGQVDL VWINGENFAA
MAKHQLLAPN WVDRLPNFGL TDPDNNPAMT RDFGVPTQGM EAPWGKAALT FYYDSLVTTS
PPQTLQQLSL WAKQHPGRFT YPKPPDFLAT SFLKYALIVL NNSQPEAIKN LLYQPATTQS
QALLLPVLWQ YLDELHPHLW RKGQHFMSSG MELRRLIGDG ELALAFTFSA AEIPAAVARF
ELPDSSRSYR MQDGSLSNIH FIAIPYNAAH RDSAKLVVNF LLSPQAQAHK QQANIWGDTS
VLALSKLTAE QQTWFEPPAQ SHPSATIANQ AISPALSEPD PSWSKVITKL WLQRYGVMQ
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