| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2930 |
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| Symbol | |
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| ID | 4279835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3518240 |
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| End bp | 3519154 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135750 |
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| Product | signal peptidase I |
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| Protein accession | YP_751608 |
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| Protein GI | 114564094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.242953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGCCT ATTTTTCGCT CATTTTAGTG CTCGTAACCT TAGTCAGTGG GCTTATTTGG
TTAATTGATG TGGTATTTTT TGCGCCTAAA CGCCGCGAAA GCTTATTAAC AGCACAAGCT
AACTCAGCCA AGTTAAGTGC AGATGCGATA GATAAAATCA TCCGTGAGCC TGTGTTAGTT
GAAACTGCAC ATTCAATTTT TCCGGTTATC GCTTTTGTGA TGATTTTACG CTCGTTTATT
TACGAACCAT TTCAAATCCC ATCAGGTTCG ATGATGCCGA CACTCTTGGT TGGTGATTTC
ATATTAGTTG AAAAATTCAG TTACGGATTA CGCGATCCTG TATGGCGCAA CAAGCTGGTT
GAAACCGGTG AACCTGAGCG CGGAGATGTA TTTGTATTTA AATATCCTGA AAATCCAAAA
ATTGACTACA TAAAGCGAGT AGTTGGTTTA CCAGGTGACA AGATATTTTA TCGTAATAAA
CAACTGATGA TCCAAGAAGC GTGTACTAAT GAAACTGACT GTCCTGCTGC TCATACTATT
GAACATGTAG AGATTAATCG CGGTGAGTTT AGCCAAAATG ACGTGCCATT AATTCGTTTG
AGTGAGCAAT TAGGCGATGT TGAGCACGAT ATTTTAATTA ATCCAACGCG CCCTGATTTT
AGACAGCATT TTTATCCTCA AGCAGGTCTT CCTGCTGGTG AGTTTGTCGT GCCAAAAGGT
ATGTACTTTG CCATGGGTGA TAATCGCGAT AACAGTACCG ACAGTCGTTT TTGGGGTTTT
GTACCGGAAG ATAATCTTGT CGGTAAAGCC GTTGCAATTT GGATTAGTTT TGAATTTGAT
CGTAAGCCGA GTGATGTGTT ACCAACATGG GTACCGACCG GTGTACGTTT TGATAGAGTA
GGTGGAATAC ATTGA
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| Protein sequence | MAAYFSLILV LVTLVSGLIW LIDVVFFAPK RRESLLTAQA NSAKLSADAI DKIIREPVLV
ETAHSIFPVI AFVMILRSFI YEPFQIPSGS MMPTLLVGDF ILVEKFSYGL RDPVWRNKLV
ETGEPERGDV FVFKYPENPK IDYIKRVVGL PGDKIFYRNK QLMIQEACTN ETDCPAAHTI
EHVEINRGEF SQNDVPLIRL SEQLGDVEHD ILINPTRPDF RQHFYPQAGL PAGEFVVPKG
MYFAMGDNRD NSTDSRFWGF VPEDNLVGKA VAIWISFEFD RKPSDVLPTW VPTGVRFDRV
GGIH
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