Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2927 |
Symbol | |
ID | 4279832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3515800 |
End bp | 3516522 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135747 |
Product | DNA repair protein RecO |
Protein accession | YP_751605 |
Protein GI | 114564091 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTA TGAAACGTGG CTATGTGCTT CATCATCGAC AATTTCGTGA ATCGAGCGTG ATCGTTAATT TGCTAGTAGA GGGTGTTGGA CGTGTTGATG CCATTACTCG AGTCGGTTCT GGTAAACGGT CAATTAAAAG TATCTTACAA CCTTTTCAAC CGCTAATTAT CCAATTTAGT GCCAAGTCCG AAGCCAGAAA TTTAGGGTTG AAAAATATTA CCCAAATTGA ATCCGCTGCA CCTGCTATGC CGTTGAGCGG TAATAGTCTT TATTCTGGTT TTTACTTAAA CGAAATATTG GTTCGCCTAT TATCGGTAGA TCACCAAGCT GAAGGTCTCT TTCTCGATTA TCATCGTGCG CTACTGGCGT TAGCGAAACA GTTTTGTTCA AGCCACCTGC GTTATTTTGA AATGGCATTG TTACTCGAGT TAGGTGCATT GCCGTCTCTT GCTTATGACA CCCAAGGTGA CTCGTTAGAT AACCGTTGTC ACTATCGGTT TATTGCCGAG AGTGGTTTTA TCCCTGTAGC AACAACTCAA GAAAGCCCTT TTTCTCATGG CAAAGGCTGC TTATCTGGAG CAATGTTGCT AGCATTGGCA TCACAAAACC TGCAACCTGA ACAGTTTAAT CAAGCCAAAG GGTTAATGCG TTATTTACTC ACACCATTGT TAGGTAATAA GCCGTTATTA AGTAGGCAGT TATTCAGTAA CAAAGCGGAT TAG
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Protein sequence | MATMKRGYVL HHRQFRESSV IVNLLVEGVG RVDAITRVGS GKRSIKSILQ PFQPLIIQFS AKSEARNLGL KNITQIESAA PAMPLSGNSL YSGFYLNEIL VRLLSVDHQA EGLFLDYHRA LLALAKQFCS SHLRYFEMAL LLELGALPSL AYDTQGDSLD NRCHYRFIAE SGFIPVATTQ ESPFSHGKGC LSGAMLLALA SQNLQPEQFN QAKGLMRYLL TPLLGNKPLL SRQLFSNKAD
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