| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2921 |
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| Symbol | |
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| ID | 4279826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3509804 |
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| End bp | 3511177 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135741 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_751599 |
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| Protein GI | 114564085 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00726192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ATTTATCTGA CAGACTTTCA CGCACACTAA AAAACATTAG TGGCCGTGGT
CGCTTAACAG AAGACAACAT TAAAGAAACC CTGCGTGAAG TGCGTATGGC GCTGCTTGAG
GCGGATGTAG CTTTACCTGT TGTTAGAGAC TTCGTTAACA GCGTAAAAGA ACGCGCTGTG
GGTCAAGAGG TGTCAAAAAG CTTAAGCCCA GGGCAAGCGT TTATTAAAAT TGTCCAAAAT
GAGCTTGAAA AAGCCATGGG TGAGGCGAAT GAAGCCCTCG ACCTAGCGGC AATACCTCCA
GCCGTGATCA TGATGGCGGG TCTTCAAGGC GCGGGTAAAA CAACCTCGGT AGCCAAATTA
GGTAAGTTTT TACGCACTCG TCATAAAAAA TCAGTCCTTG TTGTTAGTGC TGACGTATAC
CGTCCAGCAG CGATTAAGCA ACTTGAGACA TTGGCTACAG AAGTCGAGGT TGAATTCTTT
CCGTCTGACG TGAGCCAAAA GCCTGTTGAT ATTGCTAAAG CAGCAATAAA CTATGCAAAA
TTAAAATTCA TTGATGTGGT GATTGTCGAT ACAGCAGGTC GCCTGCACGT TGATGAAGCC
ATGATGGATG AAATCAAACA GCTGCATGCA ACTGTCAATC CGGTAGAAAC GTTATTTGTT
GTTGATGCGA TGACGGGGCA AGACGCCGCC AATACGGCTA AAGCATTCAA TGAAGCTTTA
CCTTTGACGG GTGTTATCTT AACCAAAGTT GATGGTGATG CTCGCGGTGG TGCTGCGTTA
TCGATTCGCA GTATCACAGG TAAACCGATT AAATTTTTAG GTGTTGGTGA GAAAACCGAT
GCTCTAGAAC CTTTCCATCC AGACCGTATT GCTTCGCGTA TTCTCGGAAT GGGTGATGTG
TTGTCTTTAA TTGAAGAAGT TGAACGTGGC GTCGATAAAG ACAAAGCGAT GAAGCTGGCT
TCAAAAGTTA AATCTGGCGG CAGTTTCGAC CTAGAAGATT TTCGTGAGCA ATTACAGCAA
ATGAAAAACA TGGGCGGAAT GATGAACATG CTTGAGAAGC TTCCTGGTGT GGGACAATTA
CCACCAGAAG CATTGGCTCA GGTTCAAGAC GGTAAAATGA CCGGACAAAT GGAAGCCATT
ATTAATTCAA TGACGTCTAA AGAACGTAAG AATCCAGATT TGATTAAAGG ATCTCGTAAA
CGTAGAATCG CTGGCGGTTC TGGTACCCAA ATTCAAGATG TAAACCGCTT ATTGAAGCAA
TTTACCCAAA TGCAGAAAAT GATGAAAAAG ATGTCTGGCA AGGGTGGAAT GAAGAAGATG
ATGCGCGGAA TGGGCGGAAT GTTACCACCA GGAATGAAGT TTCCTGGTAG ATAA
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| Protein sequence | MFENLSDRLS RTLKNISGRG RLTEDNIKET LREVRMALLE ADVALPVVRD FVNSVKERAV
GQEVSKSLSP GQAFIKIVQN ELEKAMGEAN EALDLAAIPP AVIMMAGLQG AGKTTSVAKL
GKFLRTRHKK SVLVVSADVY RPAAIKQLET LATEVEVEFF PSDVSQKPVD IAKAAINYAK
LKFIDVVIVD TAGRLHVDEA MMDEIKQLHA TVNPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKV DGDARGGAAL SIRSITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEEVERG VDKDKAMKLA SKVKSGGSFD LEDFREQLQQ MKNMGGMMNM LEKLPGVGQL
PPEALAQVQD GKMTGQMEAI INSMTSKERK NPDLIKGSRK RRIAGGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSGKGGMKKM MRGMGGMLPP GMKFPGR
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