Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2865 |
Symbol | |
ID | 4279770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3447083 |
End bp | 3447757 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135683 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_751543 |
Protein GI | 114564029 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0177844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCAA ATTTACCCTC ATCTAAAAAA CTTATGCATA CCTTAGCCAA ACAACAAATT GTTCTTGCCA GTGGCAACAA AGGCAAACTT GCCGAATTTG ATCAAATGCT GACAGCATTT AATATTGAAG TATTACCACA GAATCAATTT AACGTGACAG AGGTTGCAGA GACAGGCACT ACATTTGTAG AAAACGCCAT TATTAAAGCT CGCCATGCCG CTGAAATAAC GGGTAAGGCT GCAATTGCAG ATGACTCAGG CATTGAAGTT GATGCACTAC AAGGCCAACC AGGGATTTAC TCGGCACGCT ATTCTGGTCC TGGTGCAACT GAAACTAGCA ACTACCTCAA GCTACTTGAT GCATTGCAAG GTGAAACACT TCGAAGTGCC CGTTTCCAAT GTGTACTTGT GTATATGCGT CACGCAAAAG ATCCCACGCC AATAATTTGC CAGGCTTCAT GGGAAGGAAC AATAAACCAT GTCCCACAAG GCGAACAAGG CCATGGATAT GACCCAGTGT TTATTCCACA AGGTTTTGAT TGCTCGGCAG CTGAGTTAAC TCGTGAGCAG AAAAATGCCC ATAGTCATCG AGGCAAAGCA CTTGAGTTAT TAGTGAGTGC CATGAAAGCC CAAGGTATTA TTTTATCGAA CAATACTTCT GGCGGTCATC AATAA
|
Protein sequence | MTANLPSSKK LMHTLAKQQI VLASGNKGKL AEFDQMLTAF NIEVLPQNQF NVTEVAETGT TFVENAIIKA RHAAEITGKA AIADDSGIEV DALQGQPGIY SARYSGPGAT ETSNYLKLLD ALQGETLRSA RFQCVLVYMR HAKDPTPIIC QASWEGTINH VPQGEQGHGY DPVFIPQGFD CSAAELTREQ KNAHSHRGKA LELLVSAMKA QGIILSNNTS GGHQ
|
| |