| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2861 |
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| Symbol | |
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| ID | 4279766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3444380 |
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| End bp | 3445198 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135679 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_751539 |
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| Protein GI | 114564025 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0351901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG CAAAAGTATG TTTTATCGGT GCGGGCAATA TGACTCGTAG CATTATTAGT
GGCTTAGTTA AGCATGGCTA TCCTAGTGAC CTTATTCACG CAACCAATCC AAGCAAAGGT
AAGTTAGATG CGTTGCAGCA AGATTTTTCG ATTCAAGTTT CTCACGATAA TCATGCAGCC
GCACAAGCTG CCGATGTAAT CGTGCTAAGT GTAAAACCTC AATTAATGGC GGCCGTTTGT
GAAGACTTAA GTTCACTCGA TTTAGCCAAT AAGTTAATCA TCACTATCGC TGCAGGTATT
CCAGCGTCTC GTTATCAAGA CTACTTTAAA CAACCGATAA AACTTATTCG CACTATGCCT
AATACTCCAA CTCAAATTGG CTATGGTATG ACTGGTATTT ATGCCGATGA CAGTATTTCT
GCCGAGCATA AAGCAATTTG CGAAACCTTA ATGCAAAGCG GCGGTAAAGT GGTTTGGGTT
GATAAAGAAC CGGAATTAGA TCAAGTAATA GCACTTGCTG GTAGCTCTCC TGCTTATTTT
TTCTTGTTTA TCGAGTCTAT GATCGCCTCT GGCGTCAACA TGGGTATGGC TGAAGACAAA
GCAAGACTCC TTGCTGAGCA AGCAGCATTG GGTGCTGCGC AGATGGTGAT ACAAAACCAA
CAGTTATCGG TAACCGAATT ACGTCAAAAT GTAATGTCAA AAGGCGGTAC TACGGCTAGA
GCAGTTGAAA CATTCCAACA AGGCGGGTTA GTTGAATTGG TTGATAAAGC GATGACAAAC
TGTGTTGCTA GAGCCCAAGA AATGGCTAAA ACATTCTAA
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| Protein sequence | MTQAKVCFIG AGNMTRSIIS GLVKHGYPSD LIHATNPSKG KLDALQQDFS IQVSHDNHAA
AQAADVIVLS VKPQLMAAVC EDLSSLDLAN KLIITIAAGI PASRYQDYFK QPIKLIRTMP
NTPTQIGYGM TGIYADDSIS AEHKAICETL MQSGGKVVWV DKEPELDQVI ALAGSSPAYF
FLFIESMIAS GVNMGMAEDK ARLLAEQAAL GAAQMVIQNQ QLSVTELRQN VMSKGGTTAR
AVETFQQGGL VELVDKAMTN CVARAQEMAK TF
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