Gene Sfri_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2850 
Symbol 
ID4279755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3435548 
End bp3436108 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content43% 
IMG OID638135668 
Producthypothetical protein 
Protein accessionYP_751528 
Protein GI114564014 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.507234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCT TAAAAGACCA CTTTTTAATT GCGATGCCAT CATTAGATGA CACATTTTTC 
GAGCGCTCGG TGATATACAT TTGTGAGCAT GATCAAAAAG GTGCCATGGG ACTAATGGTT 
AATCGTCCAA TCGGTGTAGA GGTTGAAGAT CTGCTTGAGC AAATGGAACT CTATTTATCG 
CCAGAGTTTG TATTCTCCCT CGATAGTCAA GTGCTCATTG GCGGCCCAGT GGCACCCGAA 
CGTGGTTTTG TGTTACATAC GCCTCAACAA CATTGGGTCA ACAGTACCGA AATTAGCGAA 
GATACTATGC TAACGTCTTC TCGAGATATA TTAGCCTCAA TTGGTTCTGA CAAATCGCCT 
GAAAATTTTG TGGTTGCACT AGGTTATTCC GGCTGGAGTA AAGATCAGCT TGAACAAGAA 
ATTGCCGACA ACACCTGGTT AACAATCAAA GCCACACCAG AGTTACTATT TAATGTTGAA 
CCTGAACAAA TGTGGCTCAT GGCTACCCAA CAGCTCGGGT TTGATATTTG GCAAATGTCT 
AGCCAAGTCG GTCATGCTTA A
 
Protein sequence
MDSLKDHFLI AMPSLDDTFF ERSVIYICEH DQKGAMGLMV NRPIGVEVED LLEQMELYLS 
PEFVFSLDSQ VLIGGPVAPE RGFVLHTPQQ HWVNSTEISE DTMLTSSRDI LASIGSDKSP 
ENFVVALGYS GWSKDQLEQE IADNTWLTIK ATPELLFNVE PEQMWLMATQ QLGFDIWQMS 
SQVGHA