| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2829 |
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| Symbol | |
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| ID | 4279734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3410394 |
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| End bp | 3411263 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135647 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_751507 |
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| Protein GI | 114563993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0574416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA TCGTTCTTGC TGGAGGATCT GGTACACGGT TGTACCCTTT AACTCGTGGT
GTTTCAAAAC AACTATTGCC AATTTACGAC AAGCCAATGA TTTATTATCC TTTATCTACG
CTTATGCTAG CGGGGATTAG GGATATATTG ATTATCACAA CGTCAGAAGA TAACGAATCA
TTTCGTCGTT TACTAGGTGA TGGTTCTGAT TTTGGGATCA ATCTAACGTA TGCAGTACAG
CATTCACCAG ATGGCCTAGC GCAAGCATTT TTGATCGGTG AAAAATTTAT CGGTAAAGAC
AGTGTGTGTT TAGTCTTGGG GGATAATATT TTTTATGGTC AATCCTTTAG TAAAACCCTG
AAGAATGCGG TGAATAGAGA AGACGGTGCT ACAGTATTTG GTTATCAAGT CAAAGATCCT
GAAAGATTTG GTGTGGTTGA GTTTGATAAA GATATGAAAG CCGTATCTAT AGAAGAAAAA
CCAACGAAGC CAAAATCAAG TTATGCTGTT ACAGGCTTAT ATTTCTACGA CAACAATGTT
GTCGAAATGG CAAAGCAAGT TAAGCCGTCA CATCGCGGCG AATTAGAAAT CACCACGTTA
AATGAAATGT ATTTGAACCA AGGTAACTTG AATGTGGAGT TACTCGGTCG AGGTTTTGCC
TGGTTAGATA CCGGTACACA CGAAAGCTTG CATGAAGCGT CTTCTTTTGT ACAAACGATA
GAACATGTAC AAGGCCTAAA AGTGGCTTGC TTAGAAGAGA TCGCGTGGCG TAATGGTTGG
TTGAGCTCAG AACAGCTCGC TGAATTGTCC AAGCCAATGA TGAAGAACAA CTATGGTCAA
TACTTGGAGC TTTTAGCTAA CGGATCTTAA
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| Protein sequence | MKGIVLAGGS GTRLYPLTRG VSKQLLPIYD KPMIYYPLST LMLAGIRDIL IITTSEDNES
FRRLLGDGSD FGINLTYAVQ HSPDGLAQAF LIGEKFIGKD SVCLVLGDNI FYGQSFSKTL
KNAVNREDGA TVFGYQVKDP ERFGVVEFDK DMKAVSIEEK PTKPKSSYAV TGLYFYDNNV
VEMAKQVKPS HRGELEITTL NEMYLNQGNL NVELLGRGFA WLDTGTHESL HEASSFVQTI
EHVQGLKVAC LEEIAWRNGW LSSEQLAELS KPMMKNNYGQ YLELLANGS
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