Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2827 |
Symbol | |
ID | 4279732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3408967 |
End bp | 3409515 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638135645 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_751505 |
Protein GI | 114563991 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCA TTGATACAAT CATTGCGGAC GTTAAAATCA TCGAACCAGC AGTCTTTGGG GATGAACGGG GTTTCTTTAT GGAAACGTGG AGTCAGCAAA AATTTGAAGA ACTTGTAACG GGTAAACCTA CAAAGTTTGT TCAGGATAAT CACTCTAAAT CCAAGAAAGG GATTTTACGT GGTTTGCATT ATCAGACTAA AAATACCCAA GGTAAATTAG TACGTGTGGT GTCTGGTGAA GTATTTGATG TTGCTGTTGA TATAAGAAAG GGGTCTCCTA CATTTGGCCA ATGGGTCGGT GTGTATTTAT CTGCAGAAAA TAAACGTCAG TTATGGGTGC CTGAAGGTTT TGCCCATGGT TTCTATGTAA CGAGCGAAGA AGCTGAATTT GTATATAAGT GTACTGATTA TTATAATCCT AAGGCTGAAC TATCCATTGC CTGGAATGAC AGTGATATAG GTATTAAATG GCCAATTAGT AATACACCAC TATTATCTGA AAAAGATAAG TTTGGAATAA AAATCATAGA TATGGTTGGT TTAATATGA
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Protein sequence | MKVIDTIIAD VKIIEPAVFG DERGFFMETW SQQKFEELVT GKPTKFVQDN HSKSKKGILR GLHYQTKNTQ GKLVRVVSGE VFDVAVDIRK GSPTFGQWVG VYLSAENKRQ LWVPEGFAHG FYVTSEEAEF VYKCTDYYNP KAELSIAWND SDIGIKWPIS NTPLLSEKDK FGIKIIDMVG LI
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