Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2826 |
Symbol | |
ID | 4279731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3407915 |
End bp | 3408970 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638135644 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_751504 |
Protein GI | 114563990 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.670405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAG TTGCTGTCGT TGGGACTGTT GGAATTCCAG CATGTTATGG TGGTTTTGAA TCATTAGTTG AAAACTTGAC TAGTTATACA AGTAATAAAA TCGAATACGA TGTTTTTTGT TCTAGTAAGT CATATACCAA TAAAAGATCG CACTATAATG GTGCTCAATT AAGCTATATC CCTCTTAACG CAAATGGTGT TCAAAGCATA TTTTACGACA TAATATCGCT TATTTTTTGC ATATTCAAGA AGCCTGACGT TACACTTGTT CTAGGGGTTT CTGGTTGTCT TTTTCTTCCT GTTTATCGTC TTTTGTCTAA ATCAAAAATT GTTACCAATA TAGACGGTTT GGAGTGGAAA CGTGATAAAT GGAGCAAATG GGCAAAAAAA TTCCTAAAAT TTTCAGAATA TATGGCCGTC AAGTTCTCTG ATGTTGTTAT AACCGATAAT AAAGCTATTG GTGATTACGT TAATGCTGAA TATTCAAAAG ATAATGTCGT TATCGCCTAT GGTGGAGATC ATGCGATCAT CGAAGGAAAA CATGTTGGTC CAGAACAAGA TTACTACTTG TCTTTGTGTC GTATTGAGCC AGAAAATAAT GTCCAAATGA TCTTAAATGC ATTTTCAAAG AGTCAGCATA AGCTAAAGTT TGTCGGGAAT TGGAATTCTA GCGAATTTGG CAGAAAACTA AAAAGGGAGT TCTCTGATCA ACCTAACATT GATATTGTCG ATCCTATCTA CGATGTTAAT CAGCTATTTA AGTTAAGAAG TGAGTGTAAA GGTTACGTTC ATGGTCACTC AGCTGGAGGT ACAAATCCTT CTTTAGTCGA GGCTATGCAT TTCGAAAAAA CTATTTTTGC TTTTGATTGT AATTTTAATC GGTACACTAC CGAAGACAAA GCTGTATATT TTTCTTCATC AAAAGAATTA AATGACAAAC TGACAGAGGT GACTAAAGAT GAGTTAGCTG TTATTTCTAC AGACATGAAA CAGATTGCTG ATCGGCGTTA TACATGGAAA GTTATTAATC ATATGTACGA AGAAACTTAC CTATAA
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Protein sequence | MIKVAVVGTV GIPACYGGFE SLVENLTSYT SNKIEYDVFC SSKSYTNKRS HYNGAQLSYI PLNANGVQSI FYDIISLIFC IFKKPDVTLV LGVSGCLFLP VYRLLSKSKI VTNIDGLEWK RDKWSKWAKK FLKFSEYMAV KFSDVVITDN KAIGDYVNAE YSKDNVVIAY GGDHAIIEGK HVGPEQDYYL SLCRIEPENN VQMILNAFSK SQHKLKFVGN WNSSEFGRKL KREFSDQPNI DIVDPIYDVN QLFKLRSECK GYVHGHSAGG TNPSLVEAMH FEKTIFAFDC NFNRYTTEDK AVYFSSSKEL NDKLTEVTKD ELAVISTDMK QIADRRYTWK VINHMYEETY L
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