| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2774 |
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| Symbol | |
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| ID | 4279680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3336988 |
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| End bp | 3338580 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638135593 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_751453 |
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| Protein GI | 114563939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAG TTGAAAATGA GAGCAGGCAC TGCAAAATGA AAGAGTCAAA TACAGCGATA
ACTCAAATTT CGTTGATGAA GCAAAAGCTC CATGCAGCTA AACTTGCTCT GGAAGAGATT
AATACCGATC GCAATGATAA ATTGAAAACA TTAATTCAAT TTATCACTCA TCTGAGTCTT
GCTTGTAAAG GGCAAAATTT AGAACTCGAT AATAAACTGG CTAAATTGCG CCATCATATG
CACGATTTTG AGCAAATTGA CGAAGCACTA CCAGAACTCG TCGATATCGA AAGATTATTA
AAATCTCAAT ATAACCATAC AATGACTCGT TTAGAAGACA GTCGTAATGG GCTCAATCGA
GTGATCCGTC AGATCCAACG AATTAACTCT GCTCCAGATA AATTAAAAAA AGAAATCACC
TACTTTAAGC AAGAATTAGG CAAACCATTC CATACAGTAT GGGAATATAT CCCTAAAGTA
GAAAAACTGA TTTTTTTCTA CGAAGAAATT TTAAAACATG AATTTGCAGA TGCCGACAAT
TACGAGATCT TGCCTCACCA TGTTCAGCTA GCTAAAGAGC TTGCAGCTAA AATTGCTGAA
ATTGAATTTA GAAAAGATCA ACGCGACCAA ATTCTAGTTA TAAAAGAAGT GTTACTTGGT
GATATCAGCT TAAATAACTT ACTGGAATCT TACCAATCGA TATTGAGCCT GCTGTTAGAG
AATATTGCTC GCGAAAAAAC CGCATCACAA GACTTTTTAT TTGCCCTCAA TGATGCTCTG
ACTATCGTTC GCGATGTGGT CAATAACACC CATAACAATA ACCAACGTTG TGAGCAACTT
AAAGGCCAAT TAAATAAAGA AATAAATTTA CGCGTCAATA ACGCCGACGA GTTAGTGGTA
GATGCCTATG ATCTTAGCCA ATTAAAGATT CAACTGACAG TGCAGTTATC TTCGCTTCGC
GATTCACTGT CTCGTAAAGA GGCATTAGAA CAACGTGAGC AAACCATCTT ACGTAAATCT
ATAGAGTCAA TGCGTAAAGA GCTCAATTCA ATGAGCCAGG AAGCGAATAG TTACAAAGAA
AAGCTATTTG AACATCAAAA GCTCAACCTT CTCGATCCGC TTACCCAATT GGCAAACCGT
ACGGCATTAG AAGATCGCAT GGAGCAAGAA TATCGCAACC ATGTCCGCTT TAAAACGCCA
TTGTGGATAG CCATTACAGA CATAGACCAC TTTAAAAATA TTAACGATAA CTTTGGCCAC
AGTACCGGTG ATAAAACCCT GCAAGTCATC GCTATGGCAT TAAAAAATTC ATTACGTGAT
AGTGAGTTTG TCGCTCGTTA TGGCGGTGAG GAATTTGTAT TACTATTACC TGATGTTACT
GATGAGCATA TCTCTCAATT ATTGAATCGC GTAAGAGAGA AAATCAAAAA TATTCCGTTT
AAGTTTAAAA ATCAGAGAAT TACAGTTACA TTATCTATAG GTGCTGCACA AGTCATGGAA
AACGAAACGC TTGAAGAAGC TTTCGAAAGA GCCGATGCTG CATTATACCA AGCAAAAAAC
AACGGCAGAG ACCGAGTCGT AATTGATATC TAG
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| Protein sequence | MPLVENESRH CKMKESNTAI TQISLMKQKL HAAKLALEEI NTDRNDKLKT LIQFITHLSL
ACKGQNLELD NKLAKLRHHM HDFEQIDEAL PELVDIERLL KSQYNHTMTR LEDSRNGLNR
VIRQIQRINS APDKLKKEIT YFKQELGKPF HTVWEYIPKV EKLIFFYEEI LKHEFADADN
YEILPHHVQL AKELAAKIAE IEFRKDQRDQ ILVIKEVLLG DISLNNLLES YQSILSLLLE
NIAREKTASQ DFLFALNDAL TIVRDVVNNT HNNNQRCEQL KGQLNKEINL RVNNADELVV
DAYDLSQLKI QLTVQLSSLR DSLSRKEALE QREQTILRKS IESMRKELNS MSQEANSYKE
KLFEHQKLNL LDPLTQLANR TALEDRMEQE YRNHVRFKTP LWIAITDIDH FKNINDNFGH
STGDKTLQVI AMALKNSLRD SEFVARYGGE EFVLLLPDVT DEHISQLLNR VREKIKNIPF
KFKNQRITVT LSIGAAQVME NETLEEAFER ADAALYQAKN NGRDRVVIDI
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