Gene Sfri_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2760 
Symbol 
ID4279666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3316482 
End bp3317513 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content41% 
IMG OID638135579 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_751439 
Protein GI114563925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0786676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATATA AAAACGGACA AGCACTCACA ATCTTGATTA CTGGTGGTTG TGGGTTTATT 
GGTTCTGCAT TAATCCGATT TATCCTAGGC TTTACGAATC ACAGCGTCAT TAATATCGAT 
AAACTGACAT ATGCCGCTAA TCCTCAAAGC CTTAAGATGA TAAATAAAAG TGAACGATAT 
CATTTCATCG AAGGTGATAT CTGTAATGGC ACATTATTAA CAGAAGTGTT TAATCGGTTT 
CAACCCGATG CCGTGATGCA TTTGGCGGCG GAGACTCATG TTGATCGATC CATTTCAGGC 
CCAGCTGAAT TTATTCAAAC CAATATAGTA GGCACGTATC AACTACTAGA AGCCAGCAGG 
CAATTTTATA ATGGCTTATC TAGCGATAAG GCTAGGCAAT TTCGTTTTCA CCATATTTCG 
ACAGATGAAG TGTTCGGAGA TTTACCCGAT ACCGGATATT TCAATGAACA AAGCGCCTAC 
TCCCCAAGTT CGCCATATTC CGCAAGTAAG GCATCAAGTG ATCACCTAGT GAAAGCTTGG 
CATCGAACCT ATGGTTTACC AACTTTGATC AGTTATTGCT CAAATAATTA TGGCCCATAC 
CAACATCCTG AAAAACTTAT CCCGCTCACC ATTACCCGCG CCCTTGCGGG TAAAATAATT 
CCTATTTATG GTAATGGCCA ACAAGTTCGA GACTGGCTTT ATGTTGATGA TCACGTTGAA 
GCGTTAATCA CAATATTAAC CTTAGGTAAC GTGGGTGAAA CTTATACTGT TGGCGGTAAT 
AATGAGCAAA CTAATATTCA GGTTGTGGCA TCAATTTGCC AACAACTAAC CCAATTAGTG 
CCGAATCATC AGTTGGCAAG TAGCAATGGT TTTTCCTCAC TCATTCAACA TATTACTGAT 
AGACCAGGAC ACGATCGCCG CTATGCTATT GATGCGAGTA AATTGACTAC TACATTGCAT 
TGGACACCAA AACATAACTT CTCGGATGGT TTACGCCAAA CCGTTCAGTG GTATTTGGCT 
CACTATCAAT GA
 
Protein sequence
MTYKNGQALT ILITGGCGFI GSALIRFILG FTNHSVINID KLTYAANPQS LKMINKSERY 
HFIEGDICNG TLLTEVFNRF QPDAVMHLAA ETHVDRSISG PAEFIQTNIV GTYQLLEASR 
QFYNGLSSDK ARQFRFHHIS TDEVFGDLPD TGYFNEQSAY SPSSPYSASK ASSDHLVKAW 
HRTYGLPTLI SYCSNNYGPY QHPEKLIPLT ITRALAGKII PIYGNGQQVR DWLYVDDHVE 
ALITILTLGN VGETYTVGGN NEQTNIQVVA SICQQLTQLV PNHQLASSNG FSSLIQHITD 
RPGHDRRYAI DASKLTTTLH WTPKHNFSDG LRQTVQWYLA HYQ