| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2713 |
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| Symbol | |
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| ID | 4279619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3258938 |
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| End bp | 3260767 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135518 |
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| Product | ABC transporter related |
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| Protein accession | YP_751392 |
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| Protein GI | 114563878 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00697822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT TTTTTGAATC ATTGACCCAA GCTTTACCGC AAGAAGAACC GACTCAGCCA
CCCAATACTT TGTACGCATT TTGTCGTCAT TATACCCGCG GGTTTGGTTT GCCTTTAATT
ATCATGTCAG TACTAACAGC CATAATGGCA ATGTTGGAAG TGTCACTGTT TGGCTTTATG
GGACAACTGG TAGATTGGTT AGTCACCAAA AATCCACAAA CATTGTGGCA AGATGAAAGC
ACTACCTTGA TTACCATGTC AGTGATTGTC TTAGTCGTAA TACCGCTGGT TGTCTGGTTA
CATGCTTCTA TCGTGCACCA AACGCTTTTG GGTAACTACC CCATGGCTAT TCGTTGGCAA
GCACATCGCT ATTTACTCAA GCAGAGTATT TCATTTTATC AAGATGACTT TGCAGGACGG
ATCGCCACAA AGGTAATGCA AACTTCGCTT GCTGTACGTG AAACGGTTAT GAAATTACTG
GATGTACTGA TGTATATTTT AGTGTATTTC ACCTCTATGT TGGTCATGAT TGCCACTGCT
GACGTACGTT TAATGCTACC CATGCTCGTT TGGTTAGCAG CTTATGTGTT GATCCAATGG
AAACTCGTTC CAAAGCTGAA AGCGATATCG ACAGAACAAG CCGATGCTCG CTCGACAATG
ACGGGCCGCA TTGTCGACAG TTACACCAAC ATATCAACCG TAAAGCTGTT CTCGCATACG
ACTCAGGAAG CTGACTACGC CCAAGATAGT ATGACGCGTT TCTTAAAAAC CGTTTATGGC
CAAATGCGTC TGGTAACGAT CATTAATGTT TTAGTGCAAA TCATCAATTA CTTATTAGCG
TTCACCATTG CGGCTGTGTC TATTTGGTTA TGGGCAGACA ATGCGATTAC GGTTGGTGCC
ATTGCGATTG CGGTGAGTTT AGCATTGCGT TTAAATGGCA TGTCACAATG GATCATGTGG
GAAATCAGTT CACTATTTGA AAATATTGGT ACCGTTACCG ATGGTATGAA TACGTTATCA
AAACCCATTG CTATCCAAGA TAAATTGGAT GCAAAAGACA TTGTTGTTGA CCATGGAAAA
ATCGATTTCA ACCAGGTTTG CTTTCACTAT GGTGAAAAAA CTGGCGTTAT TGAGCAACTA
AACCTGAATA TTAAAGCAGG TGAGAAAGTC GGCTTAGTGG GACGGTCTGG TGCAGGGAAA
TCGACTTTAG TAAACTTATT GATGCGTTTT CATGATATTG AAAAAGGCCA AATACTGATT
GATGATCAAC CTATAACGGA TATTACCCAA GACTCATTAC GGGCAAATAT TGGTATGGTG
ACTCAGGATA CGTCGTTATT ACACCGTTCG ATCCGTGAAA ACATTCTGTA TGGTGATCCA
CATGCCAGTG ATGAAAAATT AATGGCCGCG ATAACTCAAG CACAAGCTGC AGAGTTTATT
GACAATTTAA CGGACCCCTT TGGCAACAAA GGGCTTGATG CCCAAGTAGG TGAGCGCGGC
GTTAAGCTGT CTGGTGGTCA ACGCCAACGG ATCGCCATTG CAAGAGTATT ACTTAAGAAT
GCGCCAATTC TATTGCTTGA TGAAGCCACT TCAGCATTAG ATTCTGAAGT CGAAGCAGCG
ATTCAAGAGT CGTTGTATGA ATTGATGGAA GGTAAAACAG TGATTGCGAT AGCGCATCGA
CTTTCAACGA TTGCAGCTAT GGATAGACTC ATTGTATTAG ATAAAGGCTG TGTTGTTGAA
CAAGGTACTC ATCAAGAGCT AATTAATGCC AATGGGATTT ACGCACAACT GTGGGCCCAT
CAAACTGGCG GATTTTTAGG GTTAGATTAA
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| Protein sequence | MFKFFESLTQ ALPQEEPTQP PNTLYAFCRH YTRGFGLPLI IMSVLTAIMA MLEVSLFGFM
GQLVDWLVTK NPQTLWQDES TTLITMSVIV LVVIPLVVWL HASIVHQTLL GNYPMAIRWQ
AHRYLLKQSI SFYQDDFAGR IATKVMQTSL AVRETVMKLL DVLMYILVYF TSMLVMIATA
DVRLMLPMLV WLAAYVLIQW KLVPKLKAIS TEQADARSTM TGRIVDSYTN ISTVKLFSHT
TQEADYAQDS MTRFLKTVYG QMRLVTIINV LVQIINYLLA FTIAAVSIWL WADNAITVGA
IAIAVSLALR LNGMSQWIMW EISSLFENIG TVTDGMNTLS KPIAIQDKLD AKDIVVDHGK
IDFNQVCFHY GEKTGVIEQL NLNIKAGEKV GLVGRSGAGK STLVNLLMRF HDIEKGQILI
DDQPITDITQ DSLRANIGMV TQDTSLLHRS IRENILYGDP HASDEKLMAA ITQAQAAEFI
DNLTDPFGNK GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEVEAA
IQESLYELME GKTVIAIAHR LSTIAAMDRL IVLDKGCVVE QGTHQELINA NGIYAQLWAH
QTGGFLGLD
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