Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2703 |
Symbol | queA |
ID | 4279609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3247675 |
End bp | 3248715 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135508 |
Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
Protein accession | YP_751382 |
Protein GI | 114563868 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000074202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTTG CAGATTTTTC ATTCGACCTA CCTGATGAGC TGATTGCTCG CTATCCGACA GCACAACGCA ATGCTTCGCG TTTACTCACG TTAAGTGGCG AAAACAGTGA GCTTGCAGAC AAAAAATTTA CTGATTTATT CAATCTAATC AATCCTGGAG ACTTGATGGT GTTTAATAAC ACCCGAGTTA TACCAGCACG TTTATTTGGT CAAAAGTCGA CTGGCGGCAA GCTCGAAATT CTCGTTGAAC GCATGCTCGA CGATAAACGC ATTTTAGCCC ACGTTCGCAG TTCAAAATCT CCTAAAGTGG ATACGCTTAT CGACTTAGAT GGCGGCTACC AAATGAAAAT GTTGGCTCGT CACGATGCAT TGTTTGAGCT TGAGTTACAG TCTGATAAAA CCATATTAGA AGTGCTTGAA GACGTCGGTC ACATGCCATT GCCTCCTTAC ATTGATCGTC CAGATGAAGA TACTGATAAA GAACGTTATC AAACAGTGTA TAACCAAACG CCAGGCGCTG TAGCTGCGCC GACAGCAGGG TTACACTTTG ATGATGCCAT GTTAGCCGAT TTAAAAGCCA AAGGGGTTAA TATTGCCTTT GTTACTTTAC ATGTCGGTGC CGGTACATTC CAGCCTGTAC GAGTGGATAA TGTGCTTGAA CACAAGATGC ATTCAGAATG GGCCAATGTG TCACAAGAGG TTGTTGATCT AATTGCGCAA ACTAAAGCGG CTGGAAATCG TGTTGTTGCC GTAGGCACAA CCTCAGTACG TTCATTAGAA AGTGCAGCGC GTGCAAGTGG AGATAGTCCG CTTGAAGCCT TTAGTGGTGA TACCGATATC TTTATTTACC CAGGTTTTCA ATTTAAAGTT GTTGATGCCA TGGTCACTAA TTTTCATTTG CCAGAATCAA CATTAATTAT GCTGTTGAGT GCTTTTGCCG GTTATGAAGC GGTCATGAAG GCTTATCAAC ATGCAATTAC GCAAAAATAT CGCTTTTTTA GCTATGGCGA TGCGATGTTT GTGACGAAAA AAGCCCCGTA G
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Protein sequence | MRVADFSFDL PDELIARYPT AQRNASRLLT LSGENSELAD KKFTDLFNLI NPGDLMVFNN TRVIPARLFG QKSTGGKLEI LVERMLDDKR ILAHVRSSKS PKVDTLIDLD GGYQMKMLAR HDALFELELQ SDKTILEVLE DVGHMPLPPY IDRPDEDTDK ERYQTVYNQT PGAVAAPTAG LHFDDAMLAD LKAKGVNIAF VTLHVGAGTF QPVRVDNVLE HKMHSEWANV SQEVVDLIAQ TKAAGNRVVA VGTTSVRSLE SAARASGDSP LEAFSGDTDI FIYPGFQFKV VDAMVTNFHL PESTLIMLLS AFAGYEAVMK AYQHAITQKY RFFSYGDAMF VTKKAP
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