| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2702 |
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| Symbol | tgt |
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| ID | 4279608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3246408 |
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| End bp | 3247532 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135507 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_751381 |
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| Protein GI | 114563867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000654614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGATAC AACTGATGGT CGTGCACGTC GCGGACGTCT TATTTTTGAC
CGCGGTACTG TAGAAACGCC AGCATTTATG CCTGTGGGGA CTTACGGTAC GGTAAAAGGT
ATGACGCCTG AAGAAGTACG CGCTACCGGT GCCGACATTT TATTGGGCAA CACCTTTCAT
TTATGGTTAC GTCCTGGCGA AGAGATCATG CGTAAACACG GTGATTTGCA CGACTTTATG
AATTGGCAAC GTCCTATTTT AACGGACTCG GGTGGATTCC AAGTGTTTAG TTTAGGTGAT
ATTCGTAAAA TCACTGAAGA GGGTGTGCAT TTTCGTTCAC CGATAAATGG TGAAAAGATT
TTCTTGGACC CAGAAAAATC AATGCAGATT CAGGATTCTT TAGGATCTGA TGTGGTGATG
ATTTTTGATG AATGTACCCC GTATCCAGCA ACTCATGATG AAGCACGTAA GTCGATGCAA
ATGTCACTGC GTTGGGCTAA GCGTTCACGT GATGAGTTTG ACCGCTTAGA AAACCCGAAC
TCTTTGTTTG GCATTATTCA AGGTGGTGTG TTTGAAGATT TACGCGACGA AAGTGTAAAG
GGTCTTTTAG ACATAGGTTT TGATGGTTAT GCAGTAGGTG GTTTAGCTGT TGGCGAGCCT
AAAGCAGACA TGCACCGTAT TTTAGAACAT GTTTGTCCGC AAATTCCTGC TGACAAGCCG
CGTTATTTAA TGGGCGTGGG CAAACCTGAA GATTTAGTCG AAGGCGTTCG TCGTGGTGTG
GATATGTTTG ACTGTGTTAT GCCAACACGT AATGCCCGTA ATGGCCATTT ATTTACCAGT
GAAGGTGTGA TTAAAATTCG TAATGCACGT CACCGTGATG ACACTGCAAC ATTAGATCCT
AAGTGTGATT GTTACACTTG TAAAAACTAT TCACGTGCTT ATTTATACCA TTTAGATCGT
TGTAATGAAA TTCTAGGTGC GCGTTTAAAC ACTATCCATA ATTTACGTTA TTACCAAATG
TTGATGGAAG GTTTGCGCGG CGCAATTGAG ACAGGTACAT TAGACGCCTT TGTTAAGGAG
TTCTATACCA GTTTTGGTCG TGAAGTACCT GAGTTAATCG TTTAA
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| Protein sequence | MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDSLGSDVVM IFDECTPYPA THDEARKSMQ MSLRWAKRSR DEFDRLENPN
SLFGIIQGGV FEDLRDESVK GLLDIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTATLDP
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVKE
FYTSFGREVP ELIV
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