Gene Sfri_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2692 
Symbol 
ID4279598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3236368 
End bp3238824 
Gene Length2457 bp 
Protein Length818 aa 
Translation table11 
GC content44% 
IMG OID638135497 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_751371 
Protein GI114563857 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA ATATGAAAAA GCATAAAAAC CCAACGGTCG TGCTTAGCAT GACAGCACTC 
GCTTTGGCCA TTTCAACTCA AGTAAACGCA GCACCAGCCC CTTCTCAACT CTCTGCAACG
AATCAACAAA TTGAACAACA ATCACCTTTA CCTAAACGAT ATATCGTTAA GTTCAGAAAT
GATAATGCTG CACAGATACT CAATAGCAGT TCCGCTGTAC AAAATGTAAA TGCTGAAACG
GACAACAGTA TGGCTTACGA GCCTCCTTCA AACGAAGTAT TTACTCAATT TAGAGCCTTG
AATAGCGTAA AAGCACGAGA AATGAAGCGC GTAGGTCGCA GTAATAGTTA CTCGGTAAAG
CTCGACTCGT CTTCTATTAA AGCATTACGT TTGCGTCAAG ATGTTGAATA CGTGGAAGAG
GATTTACCCC GTAGACTGCT AGCAGAGACA ACACCTTGGG GACAAACCTT TGTAGGTGCG
ACTGTGTTAA GCGACAGCCA AGCAGGTAAC CGTACTATCT GTATTATTGA TTCTGGTTAT
GACCGCAGCC ACAATGATTT AAGTGGTAAC AATGCAACCG GGACCAATAA TTCAGGCACC
GGTAACTGGT ATCAACCAGG TAATAATAAT GCCCATGGTA CTCACGTAGC AGGTACCATT
GCCGCAATAG CAAATAACGA AGGTGTGGTC GGGGTTATGC CTAACCAGAA TGCCAATATT
CATGTTGTAA AAGTGTTTAA CGAAGCAGGA TGGGGCTACT CATCATCGTT AGTCGCTGCG
ATTGATACGT GTGTTACTTC AGGTGGTGCA AACGTAGTCA CAATGAGTTT AGGTGGCAGT
GGTTCAACCA CAACTGAGCG TAATGCATTA AATACTCATT ATAACAATGG GGTGTTATTA
ATTGCAGCTG CTGGTAATGC TGGCGACAGT AGTTATAGCT ACCCAGCATC TTATGATAGC
GTAATGTCTG TTGCCGCGGT TGACAGCAAT CTTGATCATG CTGCTTTTTC ACAATATACA
GACCAAGTTG AAATTTCAGG TCCTGGCGAG GCAATTCTAT CAACGGTTAC CGTTGGCGAA
GGTCGTTTAG CAGATATAAC TATTGGCGGT CAGTCTTACT TTAACAATGG TGTAGTGCCG
CACAATCGTT TAACCCCATC TGGTACTAGC TACACTGCTG CACCGATTAA CGCAAGTGCA
ACTGGAACCT TAGCGGAATG TACTGTAAAC GGAACCAGTT TTAATTGCGG TAGCATGACC
AATAAAATCT GTCTTGTTGA GCGTGTAGGT AACCAGGGTT CAAGTTACCC TGAAATAAAC
GCGGTTAAAG CCTGTAAAAC AGCTGGTGCC AAAGGAGTCA TTGTTTACAG TAACACTGCG
CTACCAGGGC TACAAAATCC ATTCGTCGTT GATGCTAACA GTGAAATTCT GATCCCTTCT
ATGTCTGTTG ACCGAGCAAC AGGGCTTGCA CTTAAAGCCA AGTTGGGTCA ATCAACCACT
GTGAGTAATC AAGGCAATCG AGATTATGAA TATTACAATG GCACCTCAAT GGCAACACCA
CATGTGTCGG GCGTAGCAAC ATTAGTGTGG AGTTACCACC CAGAATGTAG CGCCAGCCAA
GTACGTGCTG CATTAAATGC CACAGCAGAT GACTTAAGCG TTGCCGGTCG TGATAACCAA
ACAGGTTACG GGATGGTTAA TGCAACAGCA GCAAAGGCTT ACCTAGACGA ATCATGTAAT
GGTCCAACCG ATCCAGGTAC AGGCTCTGGT GACAGCGTAC TTGAAAAGGG CGTGGCAAAA
ACGGGCTTAG CTGGCGCTAA AAACGATGAA TTATATTTCT CGTTAGACGT TCCTGCAGGC
GCGACAGACT TAAGCTTCAC TATGAGTGGT GGCACTGGCG ATGCTGACTT ATATGTGCAG
TATGGCGCAT CACCTACCAG CAGCAGTTAC GACTGTCGTC CATGGAAAGG TGGTAATGCA
GAGTCTTGCC CAATTGCGAC GCCTCAATCT GGTACTTACT ATGTAATGCT ACAAGGTTAT
AGTGCATTTA GTGGTGTAAA TTTAGTGGCT AACTACACCG CTGGTAGCAC TGGAGGCAGC
AACACAGGCG GCCCAGCAAG CTACAACAAT ACCGGTAATT ATACAATTCC AGACAACAAC
ACTAGTGGTA TTACTAGCCC TATTACTGTT AGCCGCACTG GTGATTCAGG AACGGTATCG
GTGTCAATTG GGATTATTCA TACTTATATT GGTGATTTAA AAATCCAGTT AGTTAGCCCT
ACCGGCCAAA CGGTTGTACT GCATAACAAC ACTGGTGGTG GTACCGATAA TCTAACCCAG
ACTTACACCG CTAATATGGC AGGTGTCGAA TCAAGTGGTG TATGGACATT AAAAGCTGTT
GATAATGCGA GACAAGATAC TGGATATATT GATACTTGGA GCTTAAGCTT CCAGTAA
 
Protein sequence
MEDNMKKHKN PTVVLSMTAL ALAISTQVNA APAPSQLSAT NQQIEQQSPL PKRYIVKFRN 
DNAAQILNSS SAVQNVNAET DNSMAYEPPS NEVFTQFRAL NSVKAREMKR VGRSNSYSVK
LDSSSIKALR LRQDVEYVEE DLPRRLLAET TPWGQTFVGA TVLSDSQAGN RTICIIDSGY
DRSHNDLSGN NATGTNNSGT GNWYQPGNNN AHGTHVAGTI AAIANNEGVV GVMPNQNANI
HVVKVFNEAG WGYSSSLVAA IDTCVTSGGA NVVTMSLGGS GSTTTERNAL NTHYNNGVLL
IAAAGNAGDS SYSYPASYDS VMSVAAVDSN LDHAAFSQYT DQVEISGPGE AILSTVTVGE
GRLADITIGG QSYFNNGVVP HNRLTPSGTS YTAAPINASA TGTLAECTVN GTSFNCGSMT
NKICLVERVG NQGSSYPEIN AVKACKTAGA KGVIVYSNTA LPGLQNPFVV DANSEILIPS
MSVDRATGLA LKAKLGQSTT VSNQGNRDYE YYNGTSMATP HVSGVATLVW SYHPECSASQ
VRAALNATAD DLSVAGRDNQ TGYGMVNATA AKAYLDESCN GPTDPGTGSG DSVLEKGVAK
TGLAGAKNDE LYFSLDVPAG ATDLSFTMSG GTGDADLYVQ YGASPTSSSY DCRPWKGGNA
ESCPIATPQS GTYYVMLQGY SAFSGVNLVA NYTAGSTGGS NTGGPASYNN TGNYTIPDNN
TSGITSPITV SRTGDSGTVS VSIGIIHTYI GDLKIQLVSP TGQTVVLHNN TGGGTDNLTQ
TYTANMAGVE SSGVWTLKAV DNARQDTGYI DTWSLSFQ