Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2656 |
Symbol | |
ID | 4279563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3189889 |
End bp | 3190404 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638135456 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_751335 |
Protein GI | 114563822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00470265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CTAATAGTTT CACTAAAGAG CAACTTGTCG CATGTGGTCA TGGCAATCTT TTAGGCCCAA ATAGACCACG TTTACCTGTA GACAATATGT TGATGATTGA CCGTATCATT ACCATTAATG AAGATGGTGG TGCATTTGGT AAAGGTGAAA TTATTGCCGA ACTCGATATC ACACCGGATC TATGGTTTTT TGATTGCCAC TTTATTAGTG ATCCTGTAAT GCCTGGTTGT TTAGGTTTGG ATGCTATGTG GCAACTTGTT GGTTTCTTCC TAGGCTGGGA AGGCGCTGAA GGTAAAGGTC GTGCATTAGG TGTGGGTGAA GTGAAATTTA CCGGCCAAGT ATTACCTGAT GCAAAGAAAG TGACTTACAA GCTTAATATT AAACGTAAAA TACACCGTAA ATTGGTTATG GGTATAGCAG ATGCCACTAT GGAAGTTGAT GGTCGTCAAA TATACTCAGC AACTGATTTA AAAGTAGGTA TTTTCAGTGA TACATCAACT TTCTAG
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Protein sequence | MEKANSFTKE QLVACGHGNL LGPNRPRLPV DNMLMIDRII TINEDGGAFG KGEIIAELDI TPDLWFFDCH FISDPVMPGC LGLDAMWQLV GFFLGWEGAE GKGRALGVGE VKFTGQVLPD AKKVTYKLNI KRKIHRKLVM GIADATMEVD GRQIYSATDL KVGIFSDTST F
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