Gene Sfri_2637 details

Gene Information

• Locus tag: Sfri_2637
• ID: 4279544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3157872
• End bp: 3159833
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638135433
• Product: decaheme cytochrome c
• Protein accession: YP_751316
• Protein GI: 114563803
• TIGRFAM ID: [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA AAAAATACAC AAAAATGGCA TTGTTACTTG CTATGTCAGC ATCAATGACA 
CTGGTTGGTT GTGGCGGAGG CGATGATGGT GAAGCTGGTA ATCCAGGTAA TCCTGGTGGC 
GAGCCTGCTG AAGCGATTAA GACACTAAAC TTAGATATCA CTAAAGTCAC TTATCAAGAC 
AGCAAACCGA CTATTGAAGT ATTTGCGACC AATGAAAAAG ATCTCCCTGT AGCAGGTCTT 
AAAGACTTTG AAATTAAAAA AGTCGTCCAA CTCATTCCAG CTGGCGCAAG CGGTGCAGGT 
AATTCAGCCC AATGGCAATT TATTGGCTCC GAAAAAGCTT TTACCGACCA TGGTAACGGC 
AATTACAGTT TCACAGTCAA TGTTGAAGGG TTTAATCCTG AGCTAACCCA ACGTTATAAT 
GTAATTGCAA GTGCATCAAC CTTGCAAGAC GGCGTTACCG GAGTGCCGCG TACTGAAATT 
ACCGAAGATT TTGACGGTGA AGGATTCGAG GCTAAATACA CTAAAAACAT CGTTAACACC 
GCCACTTGTA ATACCTGTCA TGCAGAAGGT GAAAGCATTT ATCATAGCTA CACTGATTTA 
GAAACCTGTA CATCATGTCA TACCAATGAA TTGGCTATTG AAAAAGGCAA GGTTCAAGAT 
GAGTTCAGTC ACTTAATTCA TAATGTTCAT AACAATGCCA AAATGTATGG ACGCAACTTA 
GACAAGAGTG CAGAAACAGC GCATGCGATA GTGCAAGATA ATTGCACCAC TTGTCATGTT 
AATTCAGAAC AACTGAGTGA ATCGAACAAC TGGTCTCGTA TTCCAACCAT GGAAGCCTGT 
TCAAGTTGTC ATACCGACAT TGACTTTAAA ACGGGTCAAG GTCATCCGCA ACAAGTCGAT 
AATTCAAATT GTATAGCTTG TCATAATGCA AGTTGGACAG AAGAGTTGCA CACAACATCG 
TATACTCAGA AAAAAACATT TATCGATTTA TACGGAATGA CAGCAACATT AACGGCTAAT 
AAATCAAGCG CTGAAGACAA ATCAGCGACC CTATCGGTAA CAATTTTAGA TGCTAATGGT 
ACGGCCATTG ACGCAACAAG CTTAATCAGC AAAATTCAAC GCGTTGAAAC CATTACGAAC 
GTCGGACCTA ACTTCCCAAT TATGGGATAT AACCCTAGCC CAGGCAGCGG TTTAGCAAAA 
ATCAGTAAAG ACTTTATCAA AGCGGGTCTG TTACAAGCAG ATGTAATCAT TGAATCAGGT 
AACTTGGTCT ATAACATTGC ATCTCTGCCA TTTGGTGCTG GCGATACAGA TACTGCCTTT 
AGCTTTATTG GTCTTGAAAT GTGTAACGAT GGTATTCAAG CCATTGATTG TGTCGATGGC 
GTAGCAACTA CCAGTATGAA AGCCGAATTC ACAGTAGGTA CTTTCTCTGG TAATGCGCCT 
AGCTATCGTC ACACTGACTC GGTCAATTTT GGTTCATGTG ATAATTGCCA TGGCGACACC 
TTCGAGTTAC ATAAAGGACA CCATGCTGGT TTTGTGATGT CAGAACAATT AGCTCGTGAA 
CTTAATGGTG AAGTTACCAT AGGTTTAGAT GGTTGTGTGG CTTGTCATAC GCCAGATGGC 
ACTTATGCTT CTGGTGCTAA TCAAGGTGCC ATTGAAATGA AATTGCACAG TGTTCATGGT 
GAACAAGGCA TTATCAAAGA CTGTACTCAG TGTCACAGCG ACTTTAATCT TGATGCATTC 
AAAGTTAAAG GTGCACTTGC TACGTCGCAA GGCCTTTATA CAACACCTAT CACTGCAACG 
TGCGCATCTT GTCATGGATT TGACACGATT TCGCAGCATG CACAAAGTCA AGGTGCGGTT 
GTTAATGGTA GCTATCAAGA AGCCAATGAT GCTGCGCAGT TAGAAACCTG TTTCTTCTGC 
CATGCACCTA CCATTGAAAA CCACACACAA GTGAAGCTTT AA 

 

Protein sequence

MMNKKYTKMA LLLAMSASMT LVGCGGGDDG EAGNPGNPGG EPAEAIKTLN LDITKVTYQD 
SKPTIEVFAT NEKDLPVAGL KDFEIKKVVQ LIPAGASGAG NSAQWQFIGS EKAFTDHGNG 
NYSFTVNVEG FNPELTQRYN VIASASTLQD GVTGVPRTEI TEDFDGEGFE AKYTKNIVNT 
ATCNTCHAEG ESIYHSYTDL ETCTSCHTNE LAIEKGKVQD EFSHLIHNVH NNAKMYGRNL 
DKSAETAHAI VQDNCTTCHV NSEQLSESNN WSRIPTMEAC SSCHTDIDFK TGQGHPQQVD 
NSNCIACHNA SWTEELHTTS YTQKKTFIDL YGMTATLTAN KSSAEDKSAT LSVTILDANG 
TAIDATSLIS KIQRVETITN VGPNFPIMGY NPSPGSGLAK ISKDFIKAGL LQADVIIESG 
NLVYNIASLP FGAGDTDTAF SFIGLEMCND GIQAIDCVDG VATTSMKAEF TVGTFSGNAP 
SYRHTDSVNF GSCDNCHGDT FELHKGHHAG FVMSEQLARE LNGEVTIGLD GCVACHTPDG 
TYASGANQGA IEMKLHSVHG EQGIIKDCTQ CHSDFNLDAF KVKGALATSQ GLYTTPITAT 
CASCHGFDTI SQHAQSQGAV VNGSYQEAND AAQLETCFFC HAPTIENHTQ VKL