| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2622 |
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| Symbol | |
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| ID | 4279529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3138107 |
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| End bp | 3138727 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135418 |
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| Product | TonB family protein |
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| Protein accession | YP_751301 |
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| Protein GI | 114563788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.083203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGAG CACTCGTATC AATAATCATT GGTGCTGCAG TGACTTTTGG GCTGTTTGCT
TTCATGGCTT TCCTGGTCGG CGGCGGCGCA CAACGCAACG GCGAATCAGC GGAATCCCCT
GTTATTGAAA TTACGATGGA TAAACAGGAT TCGAAGGCAC AGAAAAAACC AAGGGTTACA
CCTAAGCCAC CTCCACCACC GGAGCAGCCA CCGAAGCCGG ATACTACTCC GCCTGATTCA
TCATCTAATA TTGACACTAA TATGGCGTTC AATATGGGTG GGATCGAATC TGGTGGACCA
AGTACAGGTT TCAAGCTTGG TAACATGATG ACTCGTGATG GTGATGCTAC TCCTATTGTT
CGTATTGAGC CTCAGTATCC AATTGCTGCA GCTCGTGATG GTAAAGAGGG TTGGGTTCAA
CTTACCTTTA CAATTAACGA ACTAGGTGGT GTTGATGACG TTTCTGTTAT CAAAGCTGAA
CCTAAGCGTT TATTCGATCG TGAAGCGATT CGCGCATTGA AAAAATGGAA ATACAAGCCG
AAAATTGTCG ATGGCAAGCC ATTAAGACAA AGTGGTATGA CAGTACAACT TGACTTCACA
CTAGAGAAGG GAGGTAGATA A
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| Protein sequence | MLRALVSIII GAAVTFGLFA FMAFLVGGGA QRNGESAESP VIEITMDKQD SKAQKKPRVT
PKPPPPPEQP PKPDTTPPDS SSNIDTNMAF NMGGIESGGP STGFKLGNMM TRDGDATPIV
RIEPQYPIAA ARDGKEGWVQ LTFTINELGG VDDVSVIKAE PKRLFDREAI RALKKWKYKP
KIVDGKPLRQ SGMTVQLDFT LEKGGR
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