| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2587 |
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| Symbol | |
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| ID | 4279494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3093358 |
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| End bp | 3094413 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638135380 |
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| Product | porin |
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| Protein accession | YP_751266 |
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| Protein GI | 114563753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA ACACAAATAA AAACCTAATT TCCATAGCAT TATTGTCTAC ACTGTCAATT
ACATCACTAA ATGCATTAGC TGATTCACCC ACTGCTTATG GCCGTTTAGA TATGACTCTA
ACTAATTCGG AACACGGTTT TACTACTCAA AATAGAAAAG AAGGTACCGT ACTTGAAAAC
AACTTTAGTC ACATAGGGGT TAAAGGAAGC GAAAAAATCA ATGACAATTT CCAACTAATT
TATAAGATGG AAGTACAAGT AAACGGTGCA ACAAATGAGG GTGACGACAA GTTATTTAGC
GCCAGAAACA CCTATTTAGG AGTAGAATCT TCAGCGGGTA CTATTTTAAT AGGCCGTAAT
GACACAGTAA TGAAGACTTC AAAAGGTTCA GTTGAAGCAT TTGCACTCAC AAACGCAGCC
TATAATCGTA TGATTGCAGG CCAGGACAGA AAAGCTGACG GTATAACTTA CTACTCGTCA
ACCATTGCAG GCTTATTTAC TGTTAATGGT ACTTATTTAA TGGATGACAA CTATGAAGAA
AGTGATGAAA CACAATATGC ATTAAGTGTT GTCGCAGGCG ATAAAAATCT CAGTAAAAAC
CGCTATTACT TAGCGGGAGC CTACAATACC ATCGGTGGTG TTGATGCCTA TCGTGGTGTT
GGACAAATCA AAATGGGTCA ATTTAAAGTG GGTGGTCTTT ATCAGCATTC TGAAAGCCAA
AGTTATGACC GAAAAGAAGG TGATTCTTAC TTTGTCACAG TTGCTTATGA TTTAAATGGT
GTAAATTTAA AAGTTGAATA CGGTAGAGAT GAAGCCGGTT TTGGCAAATA CTTCAAATAC
AATTCAGCAG TAGCTTCATC TACCGATTAC AAACAAGCCA CTGATGTAGG CATTACTTCA
TTAGTGTTTG GTGCCGATTA CCAGTTATCA AAATCAACCA TGCTTCAGGC CCACTACGCT
ATGTATGACG GTGAATATCA AATAGCTAAA TCTGGTACCG TAATCGACCT CGAAGACGAT
AACATTGCCA CTGTAGGCGT ACGATTTAAC TTCTAA
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| Protein sequence | MSMNTNKNLI SIALLSTLSI TSLNALADSP TAYGRLDMTL TNSEHGFTTQ NRKEGTVLEN
NFSHIGVKGS EKINDNFQLI YKMEVQVNGA TNEGDDKLFS ARNTYLGVES SAGTILIGRN
DTVMKTSKGS VEAFALTNAA YNRMIAGQDR KADGITYYSS TIAGLFTVNG TYLMDDNYEE
SDETQYALSV VAGDKNLSKN RYYLAGAYNT IGGVDAYRGV GQIKMGQFKV GGLYQHSESQ
SYDRKEGDSY FVTVAYDLNG VNLKVEYGRD EAGFGKYFKY NSAVASSTDY KQATDVGITS
LVFGADYQLS KSTMLQAHYA MYDGEYQIAK SGTVIDLEDD NIATVGVRFN F
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