| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2584 |
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| Symbol | |
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| ID | 4279491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3089056 |
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| End bp | 3089841 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135377 |
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| Product | ABC transporter related |
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| Protein accession | YP_751263 |
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| Protein GI | 114563750 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.512056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATGC CATTGCTTAA AGTAACCGAT TTAAGTAAAC AATACTTAAC CGGTTATAAG
CATTTTAAAC CTCAATATTA TCAGGCACTC TCTCCGGTTT CATTTGAACT CGGTCGCGGT
GAAACCTTGG CTATTGTGGG CTCTGTGGGA TCCGGTAAAA GTACCCTAGC CCGCATTTTA
GTAGGTGCTG AACAACGAAG TGGTGGCGAC ATATTTTTTG AAGGTGAAGC CTTAGAAACG
CGTAATTTAA AACAACGTTG TCGGTTAATC CGGATGATTT TCCAAGATCC TACAACTTCA
CTTAATCCAC GTTTATCGAT TGGTAACTTG CTTAAAGAGC CATTACGCTT TAATACTCAA
TTGAGTTCGA CTGAACGAAA AACATTGGTG ATTGAAACTC TAAGAAAAGT CGGTTTATTA
CCCGAACACG CTGAATTTTA TCCGCACATG ATTTCCGAAG GCCAAAAACA GCGTGTCGCT
GTTGCACGTG CCTTGATGCT TAACCCTAAA ATTATTATTG CAGATGAAGC ACTAACAGCA
TTAGATTTAT CTGTCCGGTC TCAGATTATT AATCTGCTAT TAAAACTGCA AAAAGAGATG
GGGTTATCGT ATATTTTTGT ATCACATAAT CTGAATATTA TCCGCCATGT TAGCGATAAA
ATTATGGTGT TGCAAAATGG TCATATGGTC GAGAAATCAA CTACTGAGGC CTTATTTACT
TCACCACAAC ATGAATACAC CCAACGACTC ATTCAAGAAC AAAGTCAATT TATGCAAAAG
CGCTAA
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| Protein sequence | MTMPLLKVTD LSKQYLTGYK HFKPQYYQAL SPVSFELGRG ETLAIVGSVG SGKSTLARIL
VGAEQRSGGD IFFEGEALET RNLKQRCRLI RMIFQDPTTS LNPRLSIGNL LKEPLRFNTQ
LSSTERKTLV IETLRKVGLL PEHAEFYPHM ISEGQKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQII NLLLKLQKEM GLSYIFVSHN LNIIRHVSDK IMVLQNGHMV EKSTTEALFT
SPQHEYTQRL IQEQSQFMQK R
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