Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2583 |
Symbol | |
ID | 4279490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3088068 |
End bp | 3089075 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135376 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_751262 |
Protein GI | 114563749 |
COG category | [V] Defense mechanisms |
COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTAC TCGATATTCG TAATCTCACC ATTGAATTAG ATACACCTGA GGGCACAGTA AAAGTGCTCG AAAAAGTCAG TTTGACTATC AATCCCGGTG AAATCCATGG ACTTGTTGGC GAATCAGGTT CTGGGCGCAG TTTATTGGCC AAAGCGATTC TAGGGGTGCT AGGTCCTAAT TGGCATATTA TTGCTGACCG TATGATGTGG GACGGAAAAA ACTTATTAGA AATGAGTTCC AAGCAACGAC GCTGCCTGAT GGGTAGTGAA ATGGCGATGA TTTTCCAAGA CCCATCTGGC AGTTTAGACC CGGTAAAAAC CATTGGCAGT CAATTGATTG AAGCGATGGT GCCCAACAAA AACATTCCTT TTTGGCGACG TGGAAAAGCA ACTTATTTAA ACGCGCAGAA ATGGCTTCAC AAGGTCGGTA TAAAAAAACC AAAACAGCTG ATGAAATGCT ATCCATGGGA GTTGTCTGAG GGCGAATGTC AAAAAGTGAT GATTGCGATG GCTGTGGCAA ATCATCCTAA ACTGCTGATT GCCGATGAGC CAACTAACTC AATGGAGCTC AACACCCAAG CGCAAATTTT CAGACTATTA TCGCAACTCA ATCAACTGCA AAACGTATCT ATTTTATTGG TTAGCCATGA ATTAGAAACC ATGGTGCACT GGTGTGATAA CTTAACGATT TTGTACAGTG GTCAGGTTAT GGAATCAGGG CCTGTTAGCG AAATGGTAGC AATGCCGTAT CACCCTTACA CTCGCGCGTT ATTAAAAAAC CTACCCGATC ATACTGAAAA AATGCGCCAC AAAGCTAATT TACCCACACT GCAAGGCTCT TCGCCGTCGT TGCAGCATTT ACCTGCCGGT TGTCGACTTG GCCCACGTTG CCCAGAAGCT CAACGCCAAT GTGTAAAACA GCCTAATCTT GAACATATCA AAGACCGCTA TTTTGCCTGC CATTTCCCTT ACCAAAGTGA GCAAGAAGAT GACGATGCCA TTGCTTAA
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Protein sequence | MPLLDIRNLT IELDTPEGTV KVLEKVSLTI NPGEIHGLVG ESGSGRSLLA KAILGVLGPN WHIIADRMMW DGKNLLEMSS KQRRCLMGSE MAMIFQDPSG SLDPVKTIGS QLIEAMVPNK NIPFWRRGKA TYLNAQKWLH KVGIKKPKQL MKCYPWELSE GECQKVMIAM AVANHPKLLI ADEPTNSMEL NTQAQIFRLL SQLNQLQNVS ILLVSHELET MVHWCDNLTI LYSGQVMESG PVSEMVAMPY HPYTRALLKN LPDHTEKMRH KANLPTLQGS SPSLQHLPAG CRLGPRCPEA QRQCVKQPNL EHIKDRYFAC HFPYQSEQED DDAIA
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