Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2582 |
Symbol | |
ID | 4279489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3087174 |
End bp | 3088064 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135375 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_751261 |
Protein GI | 114563748 |
COG category | [V] Defense mechanisms |
COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGAA TTAAAATATA CCAAGAAGAC CATATAGCCT CGCCTATGTG GCGAATGTGG CAAACATTTT CTGCGAACCC ATTTGCGGTG ATCGGTCTAT GGGCGGTGAT TTTTTTATTA ATATTAACTA TTTTCGCCCC GTTTATAGCG CCTTATTCAG CAGAGATGCA AGACCAACAA GTATTACTTT TACCGCCATC ATGGGATCCC GCAGGTACTG TAGAACACTT CCTTGGAACA GACGATCTAG GACGAGATAT TTTTAGTCGT ATCTTACACG GCGTACAATT AACCTTTGGC ATGTCATTAT TAATTGTTGC TGCATCGCTG ATATTTGGCT TTGTTATTGG TTCTCTTTCA GGAATGATGC ACGGCATAAA GTCGAGTGTG TTAAGCCACT TGCTCGATGC ATTATTGTCT ATCCCATCGT TATTAATGGC TATTCTGGTC GTCGCCGTTA TGGGGCCTGG GCTTAATAAT GTGTTTTGGG GCGTCGGGAT TGCGATGGTT CCACAATTTG TTCGAGCTAT CCATCTAGCG GTTCATGAAG AGCTGCAAAA AGAGTATGTT ACAGCGGCAA AATTAGATGG TGCCAACTCG TTGCAAGTTT TTTGGTATGT CATTATGCCC AACGTATGGG ATGTGGTGAT TATTCAGGTC ACTATGGCAA TATCGGCAGC AATTCTCGAT ATTGCCGCAC TCGGTTTTTT AAACCTTGGT GCTCAAGCAC CGAGTCCAGA ATGGGGCGCC ATGGTCGCAC AAGGGCTTGA TAATTTACTG CTTGCGCCTT GGACCGTTAC TATTCCAGGT GTCGCGATTT TGTTTACCGT ATTATCGGTC AACTTGGTCG GCGATGGTTT ACGTTCAGCC CTAGCACCGA TAAGAAATTA A
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Protein sequence | MPRIKIYQED HIASPMWRMW QTFSANPFAV IGLWAVIFLL ILTIFAPFIA PYSAEMQDQQ VLLLPPSWDP AGTVEHFLGT DDLGRDIFSR ILHGVQLTFG MSLLIVAASL IFGFVIGSLS GMMHGIKSSV LSHLLDALLS IPSLLMAILV VAVMGPGLNN VFWGVGIAMV PQFVRAIHLA VHEELQKEYV TAAKLDGANS LQVFWYVIMP NVWDVVIIQV TMAISAAILD IAALGFLNLG AQAPSPEWGA MVAQGLDNLL LAPWTVTIPG VAILFTVLSV NLVGDGLRSA LAPIRN
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