Gene Sfri_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2552 
Symbol 
ID4279460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3057041 
End bp3057511 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content42% 
IMG OID638135346 
Productnitrate reductase cytochrome c-type subunit (NapB) 
Protein accessionYP_751232 
Protein GI114563719 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GTAAATTATT ATCGATTATC GCGTTATTAG GTTTCTCTGT AAGTGTAATG 
GCTACCAGTG TACCTGAAGA CAAAATCGAC ACATTACGTT TAGCGCCAAT TAACGTAGAA 
CCGACACCGC CTGCAATGCA AGCGGTGATC AATACCGATG TTAAGCAGGT ACGTAATTAC 
CCAATGCAGC CACCGGTGAT CCCGCACAAG ATTGATGGTT ATCAAATCGA TCTTAAAGTG 
AACAAGTGTA TCCAGTGTCA TGCCCGTACC AGTACTGGTC ATTCACAGGC TCCAATGGTG 
AGCGTGACTC ACTATATGGA CCGTGATAAT AATTTCTTGG CTGATTTATC ACCACGTCGT 
TATTTCTGTA CTCAGTGTCA TGCACCGCAG TTAGATGCCA AGTTATTAGT TGAAAATGAC 
TTTGTCGATA TTGATCACTT AATGAAGGCG AAAGCCCCAG TTAAGCACTA G
 
Protein sequence
MKTGKLLSII ALLGFSVSVM ATSVPEDKID TLRLAPINVE PTPPAMQAVI NTDVKQVRNY 
PMQPPVIPHK IDGYQIDLKV NKCIQCHART STGHSQAPMV SVTHYMDRDN NFLADLSPRR 
YFCTQCHAPQ LDAKLLVEND FVDIDHLMKA KAPVKH