| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2551 |
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| Symbol | |
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| ID | 4279459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3056433 |
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| End bp | 3057032 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135345 |
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| Product | periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein |
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| Protein accession | YP_751231 |
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| Protein GI | 114563718 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.476596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAA AATTGTTTGA GCAACTAAAA ATAGTGTGGA AAGTGCTGTG TCGTCCGAGT
GTCCATTACA GCCTTGGCTT CTTAACCATT GGTGGATTCA TCGCAGGGGT TATTTTCTGG
GGCGGATTCA ACACCGCGCT GGAACTGACT AACCGTGAGC AATTCTGTAT TGGTTGTCAT
GAAATGGAAA ACAACGTTTA TCAGGAGCTG CAAACCACCA TTCACTTCAC TAATCGAAGT
GGTGTGCGTG CAACCTGTCC TGATTGCCAT GTGCCACACA ACTGGACTGA CAAAATTGCC
CGTAAAATGC AAGCATCTAA AGAAGTGTGG GGCAAAATAT TCGGCACCAT TAATACTCGT
GAAAAGTTTG AAGCAAAGCG TCGCCATTTG GCTGAAAACG AATGGAACCG ACTCAAAGCT
AACGATTCTT TAGAGTGCCG TAACTGTCAT AACTTCGACT ATATGGATTT TACTCGCCAG
TCTAAGCGTG CATCACAAAT GCATTCAACG TCACTGGCTA GCGGCGAAAA AACCTGTATC
GATTGTCATA AAGGTATTGC ACACCAATTA CCTGATATGG CGGGCGTAGA AGGGTTCTAA
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| Protein sequence | MIAKLFEQLK IVWKVLCRPS VHYSLGFLTI GGFIAGVIFW GGFNTALELT NREQFCIGCH
EMENNVYQEL QTTIHFTNRS GVRATCPDCH VPHNWTDKIA RKMQASKEVW GKIFGTINTR
EKFEAKRRHL AENEWNRLKA NDSLECRNCH NFDYMDFTRQ SKRASQMHST SLASGEKTCI
DCHKGIAHQL PDMAGVEGF
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