Gene Sfri_2543 details

Gene Information

• Locus tag: Sfri_2543
• ID: 4279451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3046463
• End bp: 3048385
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638135337
• Product: alkaline phosphatase
• Protein accession: YP_751223
• Protein GI: 114563710
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1785] Alkaline phosphatase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.365989
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA AATTTATATT ATCAACATTA ACAGTTTCAT TGGTTTTTGC ATTATCAGCT 
TGTGGTGATA ACGGTGACAA TGGCACAGAT GGAACTAACG GTATCAATGG TTCTGACGGA 
TCAAACGGTA CTAATGGTAT GAACGGAACC AACGCGTTAA TTACCCAAAC CCCCTTAGCG 
GTAGGTAATG CTAATTGTCT CAATGGTGGT GTGCAAATCG ACTCGGGTAT CGATACAAAT 
GCTGATACCG TTTTAGATGC GTCAGAAATA ACATCAACTC AATATGTATG TTCACCTGCT 
GCGACCACAG TAAACGATAC CGAACTACTA AGCAGTTTAA ATAACTCATG GTTTAAACAA 
GGCGCTGCCG AAATAGAAAC AGCAGACGAT ATTTGGAATA AAATTGATAG CCAATTAGCA 
AACAATGCCA ACGTATCGAT TGCAACTGCA TCTACCGCAG CAGAAATAAC CGCACTTAAA 
GGCTCAGCTA AGAACGTGAT TTTATTTGTT GGTGACGGTA TGGGTGTTTC AACTGTAACT 
GCTGCACGTA TTTTAGATGG CCAAAATAAA GGCATGATGG GTGAAGAAAA CCAACTAAGC 
TTTGATAAAT TCCCATTTTC TGGTTTAGCG AAAACCTACA ACGTTGATGC ACAAACACCG 
GATTCTGCAG GAACAATGAC AGCGATGATG TCAGGCATTA AAACGGATGC TGGCGTGCTA 
GGTGTTGACG AAGATGTGGT TCGTGGCAAC TGTGCTAGCA CGAAAGGCAT TGAGATGATC 
ACTGCGTTAG AGTTAGCTGA AATTGCAGGT AAATCAACGG GTGTTATCTC TACCGCACGT 
ATTACCCACG CGACACCGGC AGCAACTTAT GCAAAGTCAG CAGATCGTAA CTGGGAAGAT 
ATCTCAGATA TGGACATTGC CAACAACCCT GAGCGCGCTA ATTGTGAAGA TATTGCATTA 
CAGTTAGTCA ATTTTGAAGC CAACTTAGAA GCTCGATATG CCGGTGTAGA TGTTGATGGT 
ATTGAAGTGG TTATGGGTGG TGGTCGTCGT CATTTTTTAC CTAAAGATGT AGCATATAAC 
AGCAATGACG CAGTCAGTAC TATTGAAGGT GACCGTACTG ATGGCCGTGA CTTAACCGCA 
GAATGGCAAG CGAAGTACGC AACAAGTGCT TATGTATTTG ACCAGGCTTC ATTTAATGCT 
ATAGACACTG AAACAACACC GCGCGTATTT GGTTTATTTA ACGAATCGCA CATGCAATAC 
GAAGCTGATC GTAAAAATGA TATTGCCGGT GAACCTAGCT TGTCAGAAAT GACCGCCACT 
GCCATTAAGG TGCTTAATAA TAACGATAAA GGATTCTTCT TAACGGTTGA ATCTGGTCGT 
ATTGACCATG CTCACCATGC CGGAAATGCT TACAACGCGC TAAATGACGC GATTGAGTTT 
GCTAAAGCAG TGCAAGTAGC GGTTGATGCA ACAAGCCAAG AAGACACTTT AATTATTGTT 
ACAGCTGATC ACAGCCATGT ATTTACCATT GCAGGCTACC CTAAACGCGG TAACCCAATC 
TTAGGTAAAG TGGTTGGTAT TGGTGCAACT GAGCCAAGTT TAGCCTCAGA CGATATGCCT 
TATACCACGG TAGGTTACAC CAACGGCCTT GGCTTTAGAG ACTTAGGGAC AGAAACTGAT 
GCCGATGCCA GTTATGCAGC GGCTGCGGTA ACTGGCCGTG TTGACTTAAC CGATATTGAT 
ACATCAACAG CAGGTTTCCA CCAAGAGTCG CTAGTGCCAC TAGGCAGTGA AACGCATGCA 
GGTGAAGACG TTGGCGTTTT TGCTGTAGGA CCTGGCGCTC ACTTAATTAC AGGGACTAAT 
GAGCAAAGCT TAATATTCCA TGTAATGGAT TACGCTGGCA ACCTTTCTGG TGCAACTCAA 
TAA 

 

Protein sequence

MMNKFILSTL TVSLVFALSA CGDNGDNGTD GTNGINGSDG SNGTNGMNGT NALITQTPLA 
VGNANCLNGG VQIDSGIDTN ADTVLDASEI TSTQYVCSPA ATTVNDTELL SSLNNSWFKQ 
GAAEIETADD IWNKIDSQLA NNANVSIATA STAAEITALK GSAKNVILFV GDGMGVSTVT 
AARILDGQNK GMMGEENQLS FDKFPFSGLA KTYNVDAQTP DSAGTMTAMM SGIKTDAGVL 
GVDEDVVRGN CASTKGIEMI TALELAEIAG KSTGVISTAR ITHATPAATY AKSADRNWED 
ISDMDIANNP ERANCEDIAL QLVNFEANLE ARYAGVDVDG IEVVMGGGRR HFLPKDVAYN 
SNDAVSTIEG DRTDGRDLTA EWQAKYATSA YVFDQASFNA IDTETTPRVF GLFNESHMQY 
EADRKNDIAG EPSLSEMTAT AIKVLNNNDK GFFLTVESGR IDHAHHAGNA YNALNDAIEF 
AKAVQVAVDA TSQEDTLIIV TADHSHVFTI AGYPKRGNPI LGKVVGIGAT EPSLASDDMP 
YTTVGYTNGL GFRDLGTETD ADASYAAAAV TGRVDLTDID TSTAGFHQES LVPLGSETHA 
GEDVGVFAVG PGAHLITGTN EQSLIFHVMD YAGNLSGATQ