Gene Sfri_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2542 
Symbol 
ID4279450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3044848 
End bp3046446 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content44% 
IMG OID638135336 
Productalkaline phosphatase 
Protein accessionYP_751222 
Protein GI114563709 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.22423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAC AAGGCTTATC AGTGGTTATC GCTAGTATAT TGTCTTCGGC AACATACGCA 
GGTTCTGCAA CCGCAGCGAC AACGACTGAC ACACAACTCA ATAATGCTTG GTATAAAGAC
GGCCAAGCAA CCATCACAGA AAAATTACAA CAATCAAGAT CAACAAGAGC AAAAAATGTC
ATCTTGTTTG TTGGCGATGG TATGGGGATT TCCACACTTA CCGCAGCTCG GATTTTAAAA
GGCCAATTAG CCGGTAATTC TGGTGAAGAA GGTTACTTAA GCTTTGAAAC ATTTCCTTAT
TCTGCTCTGG TTAAAACCTA CAATGTAGAT GCTCAAACAC CAGATTCAGC AGGCACCATG
ACAGCCATGA TGAGCGGCTT AAAATCAGAC GCCGGGGTTC TGGGTGTTGA TGAAGACGTC
GTTCGTGGTA CTTGTGCCTC AGTCAAAGGC AATGAAGTAG TAACCGCCTT AGAGTTAGCC
GAAATAAAAG GCTTATCGAC GGGTGTGCTA TCAACCGCAC GTATTACTCA CGCAACGCCA
GCCGCCACTT ATGCAAAATC AGCAGACCGT AACTGGGAAG ATATCTCAGA CATGGATATT
GACAATAATG CTGAACGTGC AGATTGCGAA GATATCGCAT CACAACTGGT TAACTTTGAA
AAAAATCTAG AACAACGTTA CACCGGTGTT GATGTAGACG GCATTGATGT TGTGATGGGC
GGTGGTCGTC GTCATTTTTT ACCTAAAGAT GCCGCATTTA ATAGTGTCGA TGCCGTTAGC
GCTATTGAAG GCGACCGTAC CGATGGCCGC GATTTGACCG CAGAATGGAG TGCTATGTAT
CCAAATGGTC AATACGTTAT TGACCAAACT GGATTTGATG CCATTGATAC AGAATCCACT
GAACGTGTTT TTGCTTTATT CAATGAATCG CATATGCAAT ACGAAGCTGA CCGAGCCAAT
GATATTGCAG GCGAACCCAG CCTGTCTCAA ATGACAGAAA AAGCCATTAA AATACTTGAT
AACAATCCAA AAGGTTACTT CTTAACGGTT GAGTCTGGAC GAATTGACCA TGGCCACCAT
GCTGGCAGTG CAAGCACAGC GCTTAATGAT GCCATTGAAT TTTCAAATGC TGTTCAAGCG
GCATTAGACG CAACAAATGA TGAAGAAACA CTAATCATTG TCACGGCTGA TCACAGCCAT
GTATTTACCA TTGCAGGCTA TCCAAAACGT GGTAATCCTA TTTTGGGTAA AGTGGTGGGT
ATTGGTGCGA CTGAGCCTAG CGAAGATTCA GCTGGTAATC CTTACACCAC ATTAGGGTAT
AGCAATGGAC TTGGTTTCAG AGACTTAGGG GCTGAAACAG ATGGCGATGC ATCTTATGCT
GCTGAAGCTG TTGCAGGCCG TCAAGACATC ACTGCAATCG ATACAACAAC CTCTGGTTAT
CACCAAGAAG TGACGGTTCC ATTGAGCAGC GAAACTCACG CGGGGGAAGA TGTGGCTATT
CATACATCAG GCCCAGGTGC GCAATTAGTT CAAGGTACTG TTGAACAAAG CGTTGTATTC
CATTTAATCA ATCGTGCTCT TGGTTTAGTT GGTCAATAG
 
Protein sequence
MLKQGLSVVI ASILSSATYA GSATAATTTD TQLNNAWYKD GQATITEKLQ QSRSTRAKNV 
ILFVGDGMGI STLTAARILK GQLAGNSGEE GYLSFETFPY SALVKTYNVD AQTPDSAGTM
TAMMSGLKSD AGVLGVDEDV VRGTCASVKG NEVVTALELA EIKGLSTGVL STARITHATP
AATYAKSADR NWEDISDMDI DNNAERADCE DIASQLVNFE KNLEQRYTGV DVDGIDVVMG
GGRRHFLPKD AAFNSVDAVS AIEGDRTDGR DLTAEWSAMY PNGQYVIDQT GFDAIDTEST
ERVFALFNES HMQYEADRAN DIAGEPSLSQ MTEKAIKILD NNPKGYFLTV ESGRIDHGHH
AGSASTALND AIEFSNAVQA ALDATNDEET LIIVTADHSH VFTIAGYPKR GNPILGKVVG
IGATEPSEDS AGNPYTTLGY SNGLGFRDLG AETDGDASYA AEAVAGRQDI TAIDTTTSGY
HQEVTVPLSS ETHAGEDVAI HTSGPGAQLV QGTVEQSVVF HLINRALGLV GQ