Gene Sfri_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2522 
Symbol 
ID4279431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3016753 
End bp3017733 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content38% 
IMG OID638135317 
Productpeptidase M56, BlaR1 
Protein accessionYP_751203 
Protein GI114563690 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGAGG GTAACGAGGC TATTTTCTTG AATTTAATGA GTGTTGCAAT AACGGCTTTC 
GTTATCGTGA CGATATTAAT ATCTGCCATT ATCCCGTTGA TTAAAAATAA CCTCAATTCA 
TTTGGTTTTA TTGCTCGAAA GCGAACGTTA TGGCTATTAG CAACCGCGCC TTGGTGGATA 
GCTTTATGTT GCGTTGTCAT ATTTTTTCCA CGTCAAGATA CTAATAATTT AATCGCTTTG 
ATGGAAAAAA TTGCTCATTG GCACCATATT GATGTGTTCA AGTTTACAAG CTGGCATGGC 
TTAACGTTGG TTGTTGCAGC CCTCATATTG GCTGTGATGA TTAACCTTAT GTTTGTTCAA 
GTTCGTCGAC ACTCAATCGC GATGCACAAC CTTTTTAAAT TTTCAGATAT GCAACCTATA 
AGTTGTGATA ATAATCAGAC TATTTATTCT ATTGCATTAA GCATCCCAGC AGCTTTTACA 
ATTGGCTTGC TCAAGCCTAG GGTTTATCTT ACCACTGGAT TACTTCAACA ACTTGAACCA 
TCGGCTCTGG ATATCATTAT CCAACATGAA TTGGCGCATG TTCGTGCAAG AGATCCTCTA 
TTTAAAAGTA TTTACTCTTT TTTCTGTCTG CTTTATCCAA AGCCAATTCG CCGCATTTTA 
CAACAGCATT TTACCTTGCT CACAGAACAA CAGGCAGACT CCGTCGTAAC GGGTTATCAC 
GATAACCTTG ATGTGGCACA AACATTAATT TCAGTAGCCA AGAAACAACG TCAGTTTCCC 
CAAAGTTGTG AGGGGAGTCT GGTTAGTCAT TTTAGTCATG ATCAAATTAC ATTGCGGGTA 
CAAAAGCTTC TATCACCACA GAGCCAAATA TCCGAACTTA CTCTGGTATT TACGGGATTG 
TGTTTTCTAA CTGCAATGCT GTTTACGGTA TTAATGGTAG ATGGTCTCCA TCATCTAATT 
GAGACTTATT TTATCCATTG A
 
Protein sequence
MLEGNEAIFL NLMSVAITAF VIVTILISAI IPLIKNNLNS FGFIARKRTL WLLATAPWWI 
ALCCVVIFFP RQDTNNLIAL MEKIAHWHHI DVFKFTSWHG LTLVVAALIL AVMINLMFVQ 
VRRHSIAMHN LFKFSDMQPI SCDNNQTIYS IALSIPAAFT IGLLKPRVYL TTGLLQQLEP 
SALDIIIQHE LAHVRARDPL FKSIYSFFCL LYPKPIRRIL QQHFTLLTEQ QADSVVTGYH 
DNLDVAQTLI SVAKKQRQFP QSCEGSLVSH FSHDQITLRV QKLLSPQSQI SELTLVFTGL 
CFLTAMLFTV LMVDGLHHLI ETYFIH