Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2517 |
Symbol | |
ID | 4279426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3013249 |
End bp | 3014412 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135312 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_751198 |
Protein GI | 114563685 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.262469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TTGCCGAAAA ATATATTCAC CAACACAATT TCACCTCCGT TAACGAGCAA AATGTCAAAC GCACTTGGTA TGTGCTTGTT ATCACAGTCA TCACCATGGC CGTCGAAGTG ATTGCGGGTA CGATATATGG TTCTATGGCC TTGCTCGCTG ATGGCTGGCA TATGGGGACT CATGCCGCCG CTTTTTGTAT TACGCTATTC ACTTATAGTT ATGCAAAAAA GCATGCTAAT AGTGACAAAT TCTCTTTTGG CGTAGGCAAA GTCGGCGTTC TCGGTGGATA TACAAGTGCA ATCGCATTAG CCATTGTCGC TATCATTATG CTGGTCGAAT CTCTACACCG TTTATGGTCA CCTATTGAGA TCCAATTTAA CCAATCTATT CTTGTGGCTA TCATAGGTCT AGTCGTTAAC ATCGCCAGTA TGTTTATATT GGGCCATGAA CATCACGGCC ATGATCACGG TGACCACAAG CATCATAGCC ATAAGCATGA TGACCACAAA CACCATAGCC ACGAGCATGA TGACCACAAA CACCATAGCC ATGAACATGA TGACCACGAG CATCATAGCC ATGAGCATGA TGACCACGAG CGTCATAGCC ACGAGCATGA TGACCACGAG CGTCATAGCC ACGAGCATGA TGGCCACAAA CACCATAGCC ACGAGCATGA TGACCACAAA CTTCATAGCC ATGAACATGA TGACCACGAT CATCATAGCC ACGAGCACCA TAGTGGTAAC GACCACAATC TGAAGGCAGC TTACTTCCAC GTACTCGCTG ACGCATTAAC ATCGGTGTTA GCAATTTGTG CACTTTTGGT AGGAAAATTC CTTGGATGGT ATTGGTTAGA TCCCATCATG GGAGTCGTTG GTGCGGTGGT AATTACTAAA TGGGCTTTAG GTTTAATGAA GCAAACTAGC CCTATTCTAT TAGATGAAAA TATCGACGAA GATTACCAAT TAGACATTGT TAACACCATT GATGATGAAC AAACCAAGGT CACCGATATT CATATTTGGA GAATTAGTGC AGATCATTAT TCCGCGTCTA TCGCTATCTG CACAACAACT GACGCCAGCG TAGAATCATT TAAACACTCA TTGAATAAGT TTGATAAGCT AAGCCACTTA ACTATCGAAG TGAATTACTG CTGA
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Protein sequence | MNKIAEKYIH QHNFTSVNEQ NVKRTWYVLV ITVITMAVEV IAGTIYGSMA LLADGWHMGT HAAAFCITLF TYSYAKKHAN SDKFSFGVGK VGVLGGYTSA IALAIVAIIM LVESLHRLWS PIEIQFNQSI LVAIIGLVVN IASMFILGHE HHGHDHGDHK HHSHKHDDHK HHSHEHDDHK HHSHEHDDHE HHSHEHDDHE RHSHEHDDHE RHSHEHDGHK HHSHEHDDHK LHSHEHDDHD HHSHEHHSGN DHNLKAAYFH VLADALTSVL AICALLVGKF LGWYWLDPIM GVVGAVVITK WALGLMKQTS PILLDENIDE DYQLDIVNTI DDEQTKVTDI HIWRISADHY SASIAICTTT DASVESFKHS LNKFDKLSHL TIEVNYC
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