Gene Sfri_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2500 
Symbol 
ID4279410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2991322 
End bp2991978 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID638135296 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_751182 
Protein GI114563669 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAC CTGTACTCTA TTCGTTGAGA AATTGTCCTT ACGCAATGCG CGCTAGACTG 
GCCATTTATG CATCTAATCA GCAAATAAAC CTGCGCGACT TAGTGCTAAG TAACAAACCT 
GTCGAAATGC TTACGGTGTC GCCCAAAGGT ACAGTGCCCG TTTTAGTCAC CGCAGATAAT 
GAAGTCATCG ATGAAAGTTT ATCAATCATG CTATGGGCTT TTTCACAAAC AGACCCTGAC 
GATTACATTA GTCAAGCAAC ACCAAACGCG TTAGCTGAAA TGTTAGCGGT TATTGCAATA 
TTTGATAATG AATTCAAAGG ACATTTAGAG AAATATCGCT GCTCCAAACG TTACCATGAA 
CCGTCGCTTG TAGAAGATAG ACAACAATGT GAGCGTTATC TTGCGGATCT CGAATCAAGG 
CTTTGCCAGC ACTCATATTT AATGTCTGAC CAACCAAGTT TGACTGATTT AGCATTAATG 
CCGTTTATTC GTCAGTTTGC CAGAGTTGAG CGACAATGGT ATTTACAATC CCCCTACCCC 
AAATTACGAC AATGGCTTAA TCACTATTTA CAGAGCCGAA TGTTCAGCAA GGTGATGGTA 
CAAAACCCAA TGTGGTTAGA CTCAAAACAA GAAGTTGTTT TTGGGGCTAA TGTATAA
 
Protein sequence
MVLPVLYSLR NCPYAMRARL AIYASNQQIN LRDLVLSNKP VEMLTVSPKG TVPVLVTADN 
EVIDESLSIM LWAFSQTDPD DYISQATPNA LAEMLAVIAI FDNEFKGHLE KYRCSKRYHE 
PSLVEDRQQC ERYLADLESR LCQHSYLMSD QPSLTDLALM PFIRQFARVE RQWYLQSPYP 
KLRQWLNHYL QSRMFSKVMV QNPMWLDSKQ EVVFGANV