Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2443 |
Symbol | |
ID | 4279354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2907291 |
End bp | 2909408 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135239 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_751126 |
Protein GI | 114563613 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTAG TAGTGAAAAG GGATGGATGC CGAACTGCGT TTGATGGATG TCGAATCAAA GAGGCTGTTG TAGCAGCAAT GGAGTCTGCA GGTATAGCCG ACCATCAATA TGCACAGCAG TTAGCGCAGA CGGTAGAGCA GCAAATGACT GTGAAGACCG AAGTTGATAT TCACGAACTA CAAGATGCAG TTGAAAACTT ATTGATGTCG GGCCCGTTTA AGTCGGTGGC GCGTCATTAC ATTGAGTACC GTCACGATAG AGATAAACAC CGTGAAACCC AGAGTAAATT AAATTGTGCT ATTCGCGGTT TAGTTGAGCA ATCGGATAGT GCGATTTTAA ATGAAAATGC CAATAAAGAT GCCAAAGTCA TTCCGACCCA GCGTGATTTA TTAGCGGGCA TTGTGGCCAA GCATTATGCT AAAACCCATT TACTGCCAAA AGATGTGGTA GCCGCCCATG AAAAAGGCGA AATTCACTAT CACGACTTAG ATTATGCACC TTTTTTCCCG ATGTTTAATT GCATGCTAAT TGATTTGGCC GGCATGCTAA CTCATGGTTT TAAAATGGGT AATGCTGAAA TAGAACCGCC TAAGTCTATA TCAACTGCCA CTGCTGTTAC GGCGCAAATT ATTGCTCAGG TAGCGAGCCA TATTTATGGT GGTACCACGA TTAACCGTAT CGACGAAGTG TTAGCTGAGT TTGTGCAAAT CAGTTACCAA AAGCACCTTA GTGTCGCTAA AAAGTGGCAA GTGGCAGACG TAGAAGGTTA TGCGATGACG CAAACCGAAA AAGAGTGTCA TGACGCATTC CAGTCACTTG AATATGAAGT GAATACTTTG CATACCGCTA ATGGCCAAAC ACCGTTTGTT ACCTTTGGTT TTGGTTTAGG CGTGTCGTGG GAGTCGCGTT TAATTCAGCA ATCGATGTTA ACAGTACGTA TGGCGGGTTT AGGTAAAAAT CGCAAAACAG CAGTCTTTCC AAAATTGGTG TTTGCCATTA AAGATGGTGT GAATCATAAA GCGACTGATG CTAATTATGA TATTAAAAAG ATGGCCTTAA CGTGTTCAAG CATGCGCATG TACCCTGATA TTCTTAATTA TGATCAGGTA GTGAAAGTCA CCGGTTCGTT TAAAACCCCA ATGGGGTGTC GCTCATTTTT GGGGGCATAT GAAGAAAATG GCCAACTGGT CCATGAAGGG CGCAACAATA TAGGTGTCGT CAGCCTTAAT TTACCGCGCA TAGCGTTGGA AGCAGGCAAA GATGAACAGC GCTTTTATCA ATTACTCGAT GAGCGGTTAT TGATTGCCCG CAAAGCATTA GAAACGCGTA TTGCTCGTTT AGCTGGCGTT AAAGCACGAG TAGCACCAAT CCTTTATATG GAAGGCGCCT GTGGTGTACG CCTAAATGCT GATGATGATG TGAGCGAAAT CTTTAAAAAT GGCCGAGCAT CAATTTCGTT AGGGTTTATT GGTCTTCACG AAACCATTAA TGCTTTATAT AGCAATGCTG AACACGTGTT TGATAATGCT CAATTGCGCG ATAAAGCTGT CGCCATTATT AGTCATTTAA AGCAAGCCAC TGAGTCTTGG AAACAAGAAA CAGGTTATGG CTTTAGTTTA TACAGTACCC CAAGTGAAAA CTTATGCAGC CGTTTTTGCC AGCTTGATAC CACCCAGTTT GGCATTGTGG CAGGTGTGAC CGACAAAGGG TATTACACCA ATAGTTTTCA CTTAGATGTT GAAAAGAAAG TAAATCCTTT TGATAAGATT GATTTTGAAC AACCTTATCC AGCCATCGCC AATGGCGGGT TTATTTGTTA CGGCGAATAT CCCAACATGC AGCACAATAT TGAAGCGCTC GAAAACGTTT GGGATTACAG TTATAGCCGA GTGCCATATT ACGGCACCAA TACCCCCATT GATGAGTGTT ACGATTGCGG TTTTATTGGT GAGTTTAATT GTACCAGTAA GGGGTTTGTG TGCCCTAAAT GTGGTAATCA TGAGCCAAGC CGAGTGTCTG TTACTCGTCG CGTTTGCGGT TATTTAGGTA GCCCAGATGC GCGACCATTT AACTTCGGTA AGCAAGAAGA AGTTAAGCGC AGAGTGAAGC ATTTATAA
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Protein sequence | MLVVVKRDGC RTAFDGCRIK EAVVAAMESA GIADHQYAQQ LAQTVEQQMT VKTEVDIHEL QDAVENLLMS GPFKSVARHY IEYRHDRDKH RETQSKLNCA IRGLVEQSDS AILNENANKD AKVIPTQRDL LAGIVAKHYA KTHLLPKDVV AAHEKGEIHY HDLDYAPFFP MFNCMLIDLA GMLTHGFKMG NAEIEPPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAEFVQISYQ KHLSVAKKWQ VADVEGYAMT QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGVSW ESRLIQQSML TVRMAGLGKN RKTAVFPKLV FAIKDGVNHK ATDANYDIKK MALTCSSMRM YPDILNYDQV VKVTGSFKTP MGCRSFLGAY EENGQLVHEG RNNIGVVSLN LPRIALEAGK DEQRFYQLLD ERLLIARKAL ETRIARLAGV KARVAPILYM EGACGVRLNA DDDVSEIFKN GRASISLGFI GLHETINALY SNAEHVFDNA QLRDKAVAII SHLKQATESW KQETGYGFSL YSTPSENLCS RFCQLDTTQF GIVAGVTDKG YYTNSFHLDV EKKVNPFDKI DFEQPYPAIA NGGFICYGEY PNMQHNIEAL ENVWDYSYSR VPYYGTNTPI DECYDCGFIG EFNCTSKGFV CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NFGKQEEVKR RVKHL
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