| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2438 |
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| Symbol | ribA |
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| ID | 4279349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2901345 |
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| End bp | 2901953 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135234 |
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| Product | GTP cyclohydrolase II |
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| Protein accession | YP_751121 |
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| Protein GI | 114563608 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000479214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGTAA AGTATATCGC AACATCTAAG TTACCCACTC CTTGGGGTGT TTTTGCTATG
CACGGTTTTG AAGAAACCGC CACAGGTAAA GAACACGTTG CATTGACATT TGGTCAACTG
GATCCCACGG AGCCCATGTT AGGTCGTATT CATTCAGAAT GTTTGACCGG TGATGCATTA
TTTAGTTTAC GTTGTGATTG TGGTTTTCAA TTACAAGCGG CCATGCAGAG TATTGCTGAA
CAAGGGCAGG GGTTTCTTCT GTACTTGCGC CAGGAAGGCC GTGGTATTGG GTTACTTAAT
AAAATAAGAG CTTACGAGCT GCAAGATGCT GGTGCCAATA CGGTTGAAGC TAATGAGCGT
TTAGGCTTTG AAGCTGATAT GCGTAAATAC GACATGATTT TGCCGATGTT AACGCAAATT
GGCGTGACCA AAGTAAAGTT GATGACCAAT AACCCGCGTA AAGTGATGGC GATGCAAAAT
ATGGGTATCG AAGTCGCAGA ACGTATTCCG TTACAAGTGG GTAAAAATCG CTATAACGAA
TCATATTTAA AGACCAAATC AACAGAGTTG GGTCATATGA TGTCGGAATA CCATTTCCAC
GATGAATAG
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| Protein sequence | MSVKYIATSK LPTPWGVFAM HGFEETATGK EHVALTFGQL DPTEPMLGRI HSECLTGDAL
FSLRCDCGFQ LQAAMQSIAE QGQGFLLYLR QEGRGIGLLN KIRAYELQDA GANTVEANER
LGFEADMRKY DMILPMLTQI GVTKVKLMTN NPRKVMAMQN MGIEVAERIP LQVGKNRYNE
SYLKTKSTEL GHMMSEYHFH DE
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