| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2427 |
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| Symbol | |
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| ID | 4279338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2891424 |
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| End bp | 2892146 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135223 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_751110 |
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| Protein GI | 114563597 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAGTA ATATTCGTGT TGTTTTAGTT GGTACCTCAC ACCCTGGTAA TATTGGCTCT
ACTGCTAGAG CAATGAAAAC CATGGGCTTA TCAAATTTAT ATCTCGCAGA GCCAAGAGCT
GAGCCTGATG GGCAATCGAT AGCACTTGCT GCAGGTGCGT CAGATATTCT GAAAAACCTG
ACGCGAGTTG ATTCGTTAGA AGAAGCCATA GCCGATTGTA GTCTGGTCAT TGCCACTAGT
GCACGCAGTC GTACTCTTGA TTGGCCGATG CTTGATCCTC GCGAAGCGGG TTTAAAACTT
ACTCAAGAAA GCTTAAATGG CCCTGTTGCT ATTGTTTTTG GTCGTGAAAA TCATGGTTTA
AGTAATGAAG AGTTACAAAA GTGTACTTAC CATGTGGCTA TTCCGGCAAA CCCAGAATAT
AGCTCGCTAA ACTTGGCTCA AGCAGTACAA ATTATTTGTT ATGAAACGCG AGTCGCGCAT
CTAGCGCAAA CAGAAACACC CGCTGTAACG GATGAATATC CATTAACCTC TGAGCTAGAA
CGTTTCTTCG TCCATTTAGA GTCGACGTTG TCTAAAACAG GGTTTGTGAT TAAGAATCAT
CCTGGACAAG TGATGACTAA ACTTCGTCGT TTATACACTC GTGCACGTAT TGAAGCACCA
GAGATGAATA TTCTTCGTGG TATTTTGACT TCCATTGATA AGAAAATGGA TAAACAAGAT
TAA
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| Protein sequence | MLSNIRVVLV GTSHPGNIGS TARAMKTMGL SNLYLAEPRA EPDGQSIALA AGASDILKNL
TRVDSLEEAI ADCSLVIATS ARSRTLDWPM LDPREAGLKL TQESLNGPVA IVFGRENHGL
SNEELQKCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAQTETPAVT DEYPLTSELE
RFFVHLESTL SKTGFVIKNH PGQVMTKLRR LYTRARIEAP EMNILRGILT SIDKKMDKQD
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