Gene Sfri_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2412 
Symbol 
ID4279323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2876459 
End bp2877322 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID638135208 
Producthypothetical protein 
Protein accessionYP_751095 
Protein GI114563582 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00339272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTC AGCATCGCAA CACACCGGGT CAGGCTAGTG TCGGTTTAGG ACTTCGCCGT 
GAAATGCTGG ATGAATTTTG TCAGCAGGTG CCATCTGCCA TTAATTTTTT CGAAGTTGCA
CCTGAAAATT GGATGACATT AGGTGGCAAG TTTGGGCGTC GGTTTAAACA ATTAACTGAA
CAACACGCTT TTTTCTGCCA CGGGCTTTCG TTATCCATTG GTAGTCCTGA ACCGCTTGAT
AGTCACTTTG TACAAAATAT AAAACGCTTT TTGGATGAGC ATAATATTGA AGTGTATTCA
GAGCATTTAA GTTATTGCTC AGGTACTGGC CATATGTATG ATTTGATGCC AATCCCATTT
ACTGATGATG CAGTCATCCA TACCGCTAAG CGGATAAAGC AAGTCGAAGA CATACTCGAG
CGTCCGTTTA TTTTAGAGAA TGTGTCTTTT TATGCGGCGC CTGGTGCACA AATGACCGAA
CAAGAGTTTG TCAATGCGGT GCTGCAAGAG GCCGACTGCA AATTACTGCT CGATGTAAAT
AACATTTACG TTAATTCAAT TAACCATCAA TACGATGCAG CAGCTTACTT AGCGGCGATG
CCTACCAAAC GAATCGCTTA TCTGCATATC GCAGGACACT ATGAAGAGGA GGCCGATTTA
ATGGTCGATA CTCACGGTGC GGATATTATC GATCCAGTAT GGGCCTTATT GCAGCAGTGT
TACCAAATAC ATGGCGTGCA TCCGACGTTG CTTGAGCGTG ATTTTAATAT TCCTAAAACA
GACATACTTC TTAATGAGAT TAATCAAATT CATCAGTATC AACAAAATGC CTTAACGCAG
CAGTCAATAT TGAGGAAGGC ATAA
 
Protein sequence
MSIQHRNTPG QASVGLGLRR EMLDEFCQQV PSAINFFEVA PENWMTLGGK FGRRFKQLTE 
QHAFFCHGLS LSIGSPEPLD SHFVQNIKRF LDEHNIEVYS EHLSYCSGTG HMYDLMPIPF
TDDAVIHTAK RIKQVEDILE RPFILENVSF YAAPGAQMTE QEFVNAVLQE ADCKLLLDVN
NIYVNSINHQ YDAAAYLAAM PTKRIAYLHI AGHYEEEADL MVDTHGADII DPVWALLQQC
YQIHGVHPTL LERDFNIPKT DILLNEINQI HQYQQNALTQ QSILRKA