Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2412 |
Symbol | |
ID | 4279323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2876459 |
End bp | 2877322 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135208 |
Product | hypothetical protein |
Protein accession | YP_751095 |
Protein GI | 114563582 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00339272 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTC AGCATCGCAA CACACCGGGT CAGGCTAGTG TCGGTTTAGG ACTTCGCCGT GAAATGCTGG ATGAATTTTG TCAGCAGGTG CCATCTGCCA TTAATTTTTT CGAAGTTGCA CCTGAAAATT GGATGACATT AGGTGGCAAG TTTGGGCGTC GGTTTAAACA ATTAACTGAA CAACACGCTT TTTTCTGCCA CGGGCTTTCG TTATCCATTG GTAGTCCTGA ACCGCTTGAT AGTCACTTTG TACAAAATAT AAAACGCTTT TTGGATGAGC ATAATATTGA AGTGTATTCA GAGCATTTAA GTTATTGCTC AGGTACTGGC CATATGTATG ATTTGATGCC AATCCCATTT ACTGATGATG CAGTCATCCA TACCGCTAAG CGGATAAAGC AAGTCGAAGA CATACTCGAG CGTCCGTTTA TTTTAGAGAA TGTGTCTTTT TATGCGGCGC CTGGTGCACA AATGACCGAA CAAGAGTTTG TCAATGCGGT GCTGCAAGAG GCCGACTGCA AATTACTGCT CGATGTAAAT AACATTTACG TTAATTCAAT TAACCATCAA TACGATGCAG CAGCTTACTT AGCGGCGATG CCTACCAAAC GAATCGCTTA TCTGCATATC GCAGGACACT ATGAAGAGGA GGCCGATTTA ATGGTCGATA CTCACGGTGC GGATATTATC GATCCAGTAT GGGCCTTATT GCAGCAGTGT TACCAAATAC ATGGCGTGCA TCCGACGTTG CTTGAGCGTG ATTTTAATAT TCCTAAAACA GACATACTTC TTAATGAGAT TAATCAAATT CATCAGTATC AACAAAATGC CTTAACGCAG CAGTCAATAT TGAGGAAGGC ATAA
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Protein sequence | MSIQHRNTPG QASVGLGLRR EMLDEFCQQV PSAINFFEVA PENWMTLGGK FGRRFKQLTE QHAFFCHGLS LSIGSPEPLD SHFVQNIKRF LDEHNIEVYS EHLSYCSGTG HMYDLMPIPF TDDAVIHTAK RIKQVEDILE RPFILENVSF YAAPGAQMTE QEFVNAVLQE ADCKLLLDVN NIYVNSINHQ YDAAAYLAAM PTKRIAYLHI AGHYEEEADL MVDTHGADII DPVWALLQQC YQIHGVHPTL LERDFNIPKT DILLNEINQI HQYQQNALTQ QSILRKA
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