Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2378 |
Symbol | |
ID | 4279289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2833694 |
End bp | 2835679 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638135174 |
Product | serine/threonine protein kinase |
Protein accession | YP_751061 |
Protein GI | 114563548 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA GTAAAGCACC AAATCACTTT GCTGAAGATA AAACAGTTGT GGCAGGATTT GAACATTCTG GAAATAATAA TAAAGTTAAC TTGATTGGGA AGTGTTTCAA AAATCGCTAT TTAATTGAGT CGAAAATTGG TCATGGTGGT ATGAGTGATA TATACCGCGC CAAAGATCTC TATTTGGAGT CATTAAACGT AACAGAACCT TTTGTTGCGA TTAAAGTATT ATTATCTCAG ATATCGGATA TACCCGAAGC TCAGCAAGTC CTTATCAAAG AGTCAGTACA AACTCAAAAA CTATCTCATC CAAATATCAT CAGAGTTTAT GATGTAGATA CCGATGATGG CTTTCACTTT ATGGTGATGG AGTGGTTAGA TGGCGAATCA TTAGACCAAG TGATCAAACG TTCAAAACCA TTAGGCATCA ACTTCAAAGG ATCAATGAAA ATCATTGATC AGATTGCTTC TGCATTATCG TATGCTCATC AACAAGGTAT TGTCCATACA GACTTAAAGC CATCAAATAT CTTCCTCACT CGCCAAGGGA ACATTAAAGT TTTTGATTTT GGCGTTGCGA AAAACTTACA GCAAAGAGAG GACCGATACG CATTTGCCGA AGTCGACCAA GACTCTCCTT TAACAGGTTA TACCCCAGCT TATGCTAGTT TTGAGCAGTT ATCTGGAGAA GATGCCTGCG CGGCAGACGA TATTTTTGCT TTTTCGTGTA TTAGCTATGA GCTACTAACA AGTAAACATC CTTATAACCG TGTAGCTGCA AATGAAGTTG ATATCACCAA CAATAAGTTG ATTAAACCAA AAAATATTAG TTCACGATTA TGGCCTATGT TGAAAAAAGG TCTCGCGCTT AAAAAAGTAC AACGTGCGCC TTCCATCGAG CTAATTATCA ATAAGTTCCA CAGTAAAAGT TGGCCACTAC TCACCGCTAT TGCTGCAGGT GCTGTACTTG TGATCAGTGG GTTTCAAATT CAACAGTATT ATCAGGTTCA ATTAGACGAC TTACAGAGTA AAGTCGCTCT GACAAATAAG GCCAAAAGCG AAGTTCAAGC ATTTGAATTT ATTCCTGCTT CAGCGTTATT AGCCCAGATA GAAGATATTC CAGAAGATAA AACGCTAATT AAGAATGGTT TGTTAAAGAC GCATCAATCT GAAGTGTTGG ATATTGTTGA GCAACGTATT GCTTCTTTAC CGAAAAGCGA TAATGGTCTG TATCAAGATT ATGAAAAAAT AGCACAAGTT ATTAATGATA TAGAACGATT TTATCCTGAT TCAGTTCGCT TACTACAAAT GAAAAATCAA GCTGAGAGAA GTAAACAATC TGTTGTAGAT GCACTGTCTG AACGATTAAG TCTTTTATTA TCTCAAGCCC GTTATAACGA ACAGGGAAGT AATAATATTC AAGCCATTGT TGAAGGGTTA ACGTTTGTCG AACCTGGATA TGCATACACC GCCAGCAATG AAGAATACAC TCTCTATGCA AGCACATTTA ATAACGCCTT AAAGAAACAT GATATTACTC AAATTGATGG GTTGATTACT ACCGGCGAAT ATATTTTTGC AAACTATCCA AAAGCTAAGT CATTAATTGA ATATGGCGCT GAATTAAAAG TGGCGGTTAA AAGGTTAAAT GACTATCACA ATTTAACGGC AAAAGGTAAA ACTGCCAGCT ATCCATACGA TGCTGCTGAA GTTTATTACC GAGATACATT TAATCAATTA ACCGTGAGGT TGGATGCGAT TGATAATCCG AAAGACTTAC ATGAGTTTGA TAAAGAAGTT AGGGGGCTCG CCACGAATTT ACCTGATGAC TTTGAACCCT TGCTAACGCT TGATAAACGT TTAGCCGCTT CATTTTTACG CCAAGCAAAT GTGTATCTTG ATAAGCAATA TCTGAAGACA GCCAGAGAGT TATTTGCCAG AGGAAATGAA ATGTATGAAC GTCTCAATGG TGTTCAACGC TTATAA
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Protein sequence | MDKSKAPNHF AEDKTVVAGF EHSGNNNKVN LIGKCFKNRY LIESKIGHGG MSDIYRAKDL YLESLNVTEP FVAIKVLLSQ ISDIPEAQQV LIKESVQTQK LSHPNIIRVY DVDTDDGFHF MVMEWLDGES LDQVIKRSKP LGINFKGSMK IIDQIASALS YAHQQGIVHT DLKPSNIFLT RQGNIKVFDF GVAKNLQQRE DRYAFAEVDQ DSPLTGYTPA YASFEQLSGE DACAADDIFA FSCISYELLT SKHPYNRVAA NEVDITNNKL IKPKNISSRL WPMLKKGLAL KKVQRAPSIE LIINKFHSKS WPLLTAIAAG AVLVISGFQI QQYYQVQLDD LQSKVALTNK AKSEVQAFEF IPASALLAQI EDIPEDKTLI KNGLLKTHQS EVLDIVEQRI ASLPKSDNGL YQDYEKIAQV INDIERFYPD SVRLLQMKNQ AERSKQSVVD ALSERLSLLL SQARYNEQGS NNIQAIVEGL TFVEPGYAYT ASNEEYTLYA STFNNALKKH DITQIDGLIT TGEYIFANYP KAKSLIEYGA ELKVAVKRLN DYHNLTAKGK TASYPYDAAE VYYRDTFNQL TVRLDAIDNP KDLHEFDKEV RGLATNLPDD FEPLLTLDKR LAASFLRQAN VYLDKQYLKT ARELFARGNE MYERLNGVQR L
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