Gene Sfri_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2346 
Symbol 
ID4279258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2795583 
End bp2795930 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content39% 
IMG OID638135143 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_751030 
Protein GI114563517 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.16882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACAA ATGCAGCAAG TTTTGGACGC AGTGGTGTTC ATGACTATAT TCTATTACGC 
GCAAGTGCAG TGATCCTCGC TTGTTATACT ATTTTTTTAG TTGGCTTTAT CGCGTGTAGT
GCCCCGTTAA CTTTCGAGAT TTGGAATGGT TTGTTTGCTT CACTTCCAAT GAAAGTCTTT
ACCCTAATAA CCTTGATTGC TTTACTTATC CATGCGTGGA TTGGTGTATG GCAAGTGTTG
ACTGATTATG TCAAACATAC AGCGTTACGT GGTGTATTAC AGTTTACCTT TGTGTTGATC
GCTTTTAGTT ATTTAGCGTC AGGCATTGTA ATAGTGTGGG GTGTTTAA
 
Protein sequence
MVTNAASFGR SGVHDYILLR ASAVILACYT IFLVGFIACS APLTFEIWNG LFASLPMKVF 
TLITLIALLI HAWIGVWQVL TDYVKHTALR GVLQFTFVLI AFSYLASGIV IVWGV