Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2344 |
Symbol | sdhB |
ID | 4279256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2793092 |
End bp | 2793799 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135141 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_751028 |
Protein GI | 114563515 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0657231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAA CATTTGCATT GTATCGTTAT AATCCTGATG TAGATACCAA GCCTTATATG AAGGATTACA CCTTAGAAGT GCCTGATGGC ACTGACATGA TGGTGTTAGA TGCGTTAATT AAACTGAAAG AACAAGACTC AACGCTTGCG TTCCGTCGTT CATGCCGTGA AGGTGTGTGT GGTTCTGACG GTGTTAACAT GAATGGTAAA AACGGATTAG CGTGTATTAC GCCATTATCT ACCTTTAAAG GTAAGAAAAT TGAAATCCGT CCTTTACCAG GCATGCCAGT AGTTCGTGAT TTGGTTGTAG ACTTAACTCA GTTCTACAAG CAATACGAAA AAATTAAGCC TTATCTGATT AATGACGAAC AGGCTCCAGC TCGTGAACAT CTACAATCAC CTGAAGAGCG TGCTCATTTA GATGGTTTAT ATGAATGTAT CATGTGTGCA TGTTGTTCAA CTGCTTGTCC ATCTTTCTGG TGGAACCCTG ATAAATTTAT CGGGCCAAGT GGTTTATTAC ATGCATATCG TTTCTTAATT GACAGTCGTG ATACGGCCAC TGAAGAGCGT TTATCTGAAC TAGATGATGC TTACAGTGTG TTCCGTTGTC ATGGCATCAT GAACTGTGTT GACGTTTGTC CTAAAGGATT AAACCCAACT AAAGCGATTG GTCACATTAA GTCAATGCTG CTTAAGCGAG CTGTTTAA
|
Protein sequence | MKLTFALYRY NPDVDTKPYM KDYTLEVPDG TDMMVLDALI KLKEQDSTLA FRRSCREGVC GSDGVNMNGK NGLACITPLS TFKGKKIEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI NDEQAPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
|
| |