| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2342 |
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| Symbol | |
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| ID | 4279254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2788842 |
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| End bp | 2790038 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135139 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_751026 |
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| Protein GI | 114563513 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG AAATTAAGGT ACCCGTATTA CCAGAATCTG TTGCTGATGC AACTATTGCT
ACTTGGCATG TTAAACCTGG TGAACAGGTT ACTCGTGATC AAAACTTAGT TGATATCGAG
ACAGACAAAG TCGTGTTAGA AGTGGTAGCA CCAGAAGACG GTTCAATTTC TGAATTGTTA
TTCCAAGAAG GCGATACCGT TTTAGGTGAG CAAGTGATTG CTAATTTTGT CGCTGGTGTT
GTGTCTGGCC AAGAAGTGAC TAAAGCTGAA GCTTCAGGGC CTGCTGTCGT GGCAACGACC
GAAGCTGCTT CTGATGAATC TAATGATGCA TTAAGCCCAT CTGTTCGTCG TGTGATTGCC
GAACATAATC TTGATGCCAG TAAAATTAAA GGTTCTGGTG TGGGCGGACG TGTAACTAAG
GATGATGTAG ATGCATTCCT TAAGTCAGCT CCTGCTAAAG CCGCTGCACC AGCTGCTCCT
GTAGCACCTT TAGAAGGTCG TAGTGAGAAG CGTGTACCAA TGTCACGTCT TCGTAAAACT
ATCGCAAAAC GTCTTTTAGA AGCGAAAAAT TCAACGGCAA TGTTAACTAC GTTTAACGAA
GTTAACATGA AGCCAATCAT GGATATTCGC AAACAGTACC AAGACATTTT CGAAAAACGC
CATGGTATTC GTTTAGGCTT TATGTCTTTC TATATCAAAG CTGTGACAGA AGCGCTAAAA
CGTTTCCCAG AAGTTAACGC TTCTATTGAT GGTGATGACA TTGTTTATCA TAACTATTTC
GACATCAGCA TCGCTGTATC AACGCCTCGT GGTCTGGTAA CTCCAGTCTT GCGTGACACT
GATACCATGA ACTTAGCTGA AATCGAAAAA GCGGTTCGTG AATTAGCCAT TAAAGGCCGT
GACGGTAAAT TATCTGTTGC TGACATGACT GGCGGTAACT TCACTGTGAC TAACGGTGGT
GTTTTCGGTT CACTCATGTC TACGCCAATT TTGAACCTGC CACAAAGCGC AATCTTAGGC
ATGCATGCCA TTAAAGATCG CCCAATGGCA GTCAATGGTC AGGTTGAAAT CCTGCCTATG
ATGTACCTAG CACTCTCTTA CGACCACCGT ATTGTTGATG GTCGTGAGTC AGTTGGCTTC
TTAGTCGCGA TTAAAGACTT CTTAGAAGAT CCAACTCGTC TGCTACTTGA TCTGTAA
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVKPGEQV TRDQNLVDIE TDKVVLEVVA PEDGSISELL
FQEGDTVLGE QVIANFVAGV VSGQEVTKAE ASGPAVVATT EAASDESNDA LSPSVRRVIA
EHNLDASKIK GSGVGGRVTK DDVDAFLKSA PAKAAAPAAP VAPLEGRSEK RVPMSRLRKT
IAKRLLEAKN STAMLTTFNE VNMKPIMDIR KQYQDIFEKR HGIRLGFMSF YIKAVTEALK
RFPEVNASID GDDIVYHNYF DISIAVSTPR GLVTPVLRDT DTMNLAEIEK AVRELAIKGR
DGKLSVADMT GGNFTVTNGG VFGSLMSTPI LNLPQSAILG MHAIKDRPMA VNGQVEILPM
MYLALSYDHR IVDGRESVGF LVAIKDFLED PTRLLLDL
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