Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2312 |
Symbol | |
ID | 4279224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2756118 |
End bp | 2756600 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135109 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_750996 |
Protein GI | 114563483 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0393762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCATTA AAGACGATAT GGTAGTGCAG TTTAATTACA CGCTACGTGA TGAAAAAGGC GTTGTGCTTG AATCAAATGA AGGTCGTGAG CCGATTGCAT ATCTGCATGG GCATGACAAC ATGATGCCTG GTATCGAAGC TGCTATTAAT GGTAAAGAAA TTGGCGAGAA GTTTACCATT ACTCCACCAG CCGCTGACAC TTATGGTGAA CGCCAAGAAG ATTCAGAGCA GCGTGTATCA GTTAAACATC TTGTCGGCGC AAAAGTATGG AAACCTGGCA TGGCTGCAGT GGTGAACACT GAACAAGGCC AACGTCAAGT TACCATCATT AAAGTGGGTA AATTTATGGC AACTGTTGAT GTCAATCATC CACTGTCTGG CCGTGAATTA ACATTCGACA TCGAAATCGT CGGTGCTCGT GATGCTTCAG ACGAAGAAAT TGCTCATGGC CACGCCCATG GTGCTGGTGG TCATCACCAC TAA
|
Protein sequence | MSIKDDMVVQ FNYTLRDEKG VVLESNEGRE PIAYLHGHDN MMPGIEAAIN GKEIGEKFTI TPPAADTYGE RQEDSEQRVS VKHLVGAKVW KPGMAAVVNT EQGQRQVTII KVGKFMATVD VNHPLSGREL TFDIEIVGAR DASDEEIAHG HAHGAGGHHH
|
| |