Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2291 |
Symbol | |
ID | 4279203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2732799 |
End bp | 2735417 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638135088 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_750975 |
Protein GI | 114563462 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCAA CAAAGTGGCA CAGTTTACAA TCTGCAGATG TTCTACAGCG GCTTGATTCT TCGCTAACGG GCCTGACTAC GGAACAAGCC AAAAAACGCC TGATTGAATA TGGTCATAAT ACTATTATCC AAAAACCACG ACGTTCCTTG CTGTTCATTT TACTCGGGCA GTTTTCTGAT TTCATGATAG TTGTGTTGTT GGTAGCAGCG GTGATTTCGG GTTTTCTTGG TGAGCCACAA GATACCATTG CTATTATGGT GATCGTATTG CTTAATGCAA TTATCGGCAC AGTACAGGAA TTTAGGGCAG AGCGCGCTGT GGCGGCACTG CGAAAAATGG CAGCGCCAGA TGCTTATGTA TTTCGCGATG CACTTGAAGT GACGATTGAC GCAACAGCAT TAGTGCCGGG TGATGTTGTT ATGCTTGAAG CCGGAAATAT TGTGCCTGCT GATGTGCGCT TACTGGAAGG GGAAGAACTG CTGGTCGATG AATCAACCCT GACTGGTGAA TCACATGCAA TAGAAAAGCA AACAGAACCG CTAGCTGATA AAGAATTAGC CATTGGTGAT CGTTTGAATC TAGTCTTTAA GAACAGCATG ATTATTCGTG GACGTGGTAA AGGTGTGGTA GTTGCCAGCG GCATGGAAAC CGAGATAGGC CAAATAGCTG GACTGCTACA AGATGAAACG AGTGTAAAAA CCCCCTTGCA AACACGATTG TCTCGTTTTG GCCGATACCT TGCCTTGACT GTACTGGCAA TATGTATAGT GGTGTTTGTT GTCGGCTTGC TGCAAGGACA GTCAATATTA TTGATGTTTT TAACCTCGGT GAGCTTGGGT GTAGCTGCGA TACCGGAAGC ACTCCCTGCG GTGGTGACCA TTTCACTTGC TTTGGGTGCA CGTAAGCTGA TCCGACATAA TGTGCTCGTG CGTAACTTAC CCTCTGTCGA AACCCTAGGT TCAGTTACCT ATATATGTAC AGACAAGACC GGTACCCTGA CACAAAATCT CATGACAGCG GAGTTATTTT TTGTCGCTGG AGAACTGCGA CAATCAATGC CTGAGTCAGA AGCCAGTATT CCATGGACAG AGCTTGGCCA AGCCATGGCA CTAAACAATG ACATCATGGA TAAAGACGGC AAACCTGCAG GTGAGCCGAC CGAGCTAGCA CTTTTCGAAG CCGCTCACAT GGTCGGTTTT GATAAGTCCA TCTTAGAGCA GGCAAAGCCT CGTATAGCCG TTATTGCGTT TGATAGCGAA CGTAAACAGA TGACAACCTT GCATCAAACA TCCGATGTTA TAACTGCGTA CATCAAAGGC GCGCCAGAGC AGGTGCTACA ACAATGTATT CAGGGATTAA GTAATGATGG GGTTGCAGTA TTTGAAGCGA CGGCCATACT GGCTGAAGCA GCACAGTTAG CGAATAAAGG TTACCGTGTA CTGGCATTTG CAAAACGTGA ATTTAGCTGT TTGCCAGATC CGTTGGACGC TGAAGTGGTG GAGCGAGAAC TCACCTTTTT GGGGCTGGTG GCGTTGATCG ATCCGCCGCG ACCCGAAGTG CCTCAGGCCG TAAAAGATTG TCTCACAGCG GGAATTATTC CGGTAATGAT CACTGGCGAT CATCCGGGTA CCGCGTTTGC GATAGCACAA CGTTTGGGCA TTATAGATAA CGATAGGGCG ATGCTAAGTG GTGATCAACT CGCTAAAATA TCCGATGAAG AATTCTCCCG CCTAGTTGAC TCAATATGGG TGTACGCAAG GGTGACACCG GAACAAAAAT TACGTATCGT CAAAGCGTTG CAGGACAAAG GCGAATTTGT CGCTATGACT GGAGATGGCG TCAACGATGC GCCGGCATTG AAGCGTGCCA GTATTGGTGT CGCCATGGGC CAGAAGGGAA CCGATGTGGC TCGCGAAGCT GCGGATATGG TGTTATTGGA CGATGACTTT TCTTCAATCG TGCGAGCGAT ACGGTCGGGT CGACGCACTT TCGATAATAT TCGCAAATTT ATTAAATATA CTTTGAGTTC CAATGCTGGT GAAATCTGGA CCTTGTTCCT TGCACCGTTT CTCGGGTTGC CTATTCCTTT ACTGCCGATT CATATCCTGT GGATTAACCT AGTGACCGAT GGTCTGCCGG GTCTTGCATT AACCGCCGAG CCAGCCGAAC CGAATATAAT GAGTCGTGCG CCCAGCCCTC CAAAGGAAAG TATTTTTTCT CATGGTATGT GGCAACATAT TCTCTGGGTA GGATTGTTTA TTGGTGGAAT ATCCATTGCG ACTATGGCGT GGGCTATTTC TCGTGACGTT GTTTACTGGC AGACAATGGT GTTTACGGTA TTAACGGTAT CGCAGTTGTT TCACTCACTG GCGGTTCGCA GTGAGAGTAC TTCATTATTG CGTATTGGTT TGTTCAGTAA TTTACCGATG TTAGGGGCTT TTCTGTTAAC GTTGCTATTT CAGATGGTCG TGATTTATAC ACCTGCGTTA AACACCATTT TCCATACACA GCCTCTGCCA ATGGTCGATC TTATTGTCTG TCTGTTGTTG TCTTCACTTA TTTTGTTTGC CGTCGAGATT GAAAAATGGT TAATGCGTCG TGGTGTTATT TACGCATAG
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Protein sequence | MSSTKWHSLQ SADVLQRLDS SLTGLTTEQA KKRLIEYGHN TIIQKPRRSL LFILLGQFSD FMIVVLLVAA VISGFLGEPQ DTIAIMVIVL LNAIIGTVQE FRAERAVAAL RKMAAPDAYV FRDALEVTID ATALVPGDVV MLEAGNIVPA DVRLLEGEEL LVDESTLTGE SHAIEKQTEP LADKELAIGD RLNLVFKNSM IIRGRGKGVV VASGMETEIG QIAGLLQDET SVKTPLQTRL SRFGRYLALT VLAICIVVFV VGLLQGQSIL LMFLTSVSLG VAAIPEALPA VVTISLALGA RKLIRHNVLV RNLPSVETLG SVTYICTDKT GTLTQNLMTA ELFFVAGELR QSMPESEASI PWTELGQAMA LNNDIMDKDG KPAGEPTELA LFEAAHMVGF DKSILEQAKP RIAVIAFDSE RKQMTTLHQT SDVITAYIKG APEQVLQQCI QGLSNDGVAV FEATAILAEA AQLANKGYRV LAFAKREFSC LPDPLDAEVV ERELTFLGLV ALIDPPRPEV PQAVKDCLTA GIIPVMITGD HPGTAFAIAQ RLGIIDNDRA MLSGDQLAKI SDEEFSRLVD SIWVYARVTP EQKLRIVKAL QDKGEFVAMT GDGVNDAPAL KRASIGVAMG QKGTDVAREA ADMVLLDDDF SSIVRAIRSG RRTFDNIRKF IKYTLSSNAG EIWTLFLAPF LGLPIPLLPI HILWINLVTD GLPGLALTAE PAEPNIMSRA PSPPKESIFS HGMWQHILWV GLFIGGISIA TMAWAISRDV VYWQTMVFTV LTVSQLFHSL AVRSESTSLL RIGLFSNLPM LGAFLLTLLF QMVVIYTPAL NTIFHTQPLP MVDLIVCLLL SSLILFAVEI EKWLMRRGVI YA
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