Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2241 |
Symbol | |
ID | 4279153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2685934 |
End bp | 2686947 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638135038 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_750925 |
Protein GI | 114563412 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA CCATAAAAAC CTTTTTTTTA GCCAGTCTTA TTCCTCTATT TACAGTCGTT TGTCTTGGAG GATATTGGCT TGTCTCTGGC TTAATCGCTT ACCAAAAACA GCCATTACAG TTAACTGAAA TTCAAACGTT AACGGTTGAA CCTGGCACCA GTGTGATTAA GCTTGCGCAA CAACTAGAAC AACAATCATT GATTACCGAT AGTTGGAAAG TTAAATATCT GGTCAAACTT GAACCTAAGC TTGCTCATAT AAAAACCGGT CTGTATCAAA TGATCCCTGG CGATACATTA GAAGCGTTAT TAAAGCGATT ATATTTAGGC CAACAAGTGG TTTTCAGCAT CACCTTAATC GAAGGTAAAA CTATTACCGA GTGGCAGCAA ACATTGTCCA CTACAGAGCA TTTGGCAAAG AATACCGACG ACTTTAATCA AGTGTTATTA CAAAATGGTG ATACTTCTGG TTTGCCTGAG GGTAAGTTCT ATCCAGAAAC ATTCCATTAT CATGCAGATG ATAACTTACA GACGATTTTA AACCGCAGCT ACACCATGAT GCAGCTAAGC TTAGCGCAAG CATGGGAAGG GCGCGATCCT GATTTAGCCT TATCATCACC TTACGAATTA TTGATTATTG CATCTATTAT TGAAAAAGAA ACGGGCAAAC CTGAAGAGCG TGATTGGGTG TCTGCAGTGT TTAATAATAG ACTTAAAAAA GGCATGCGTC TTCAGACCGA CCCCACGGTA ATTTATGGCA TGGGTGAACG TTATAAAGGT AATATTACTC GTAAAGATTT ACGCGAAGCA ACGGCATTCA ATACCTACAA AATTGATGGT TTACCGCCAA CGCCTATCGC TGCACCAAGT CGCGCATCAT TATTTGCCGC CGCTAATCCA GCCAAAGTAA ATTACTTGTA CTTTGTTTCA CGTAATGATG GCAGTCATGT GTTTTCATCT ACGTTGAAAG CCCATAATAA TGCCGTAAAC GAATTCCAGA GAAAAAGAAA ATGA
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Protein sequence | MIKTIKTFFL ASLIPLFTVV CLGGYWLVSG LIAYQKQPLQ LTEIQTLTVE PGTSVIKLAQ QLEQQSLITD SWKVKYLVKL EPKLAHIKTG LYQMIPGDTL EALLKRLYLG QQVVFSITLI EGKTITEWQQ TLSTTEHLAK NTDDFNQVLL QNGDTSGLPE GKFYPETFHY HADDNLQTIL NRSYTMMQLS LAQAWEGRDP DLALSSPYEL LIIASIIEKE TGKPEERDWV SAVFNNRLKK GMRLQTDPTV IYGMGERYKG NITRKDLREA TAFNTYKIDG LPPTPIAAPS RASLFAAANP AKVNYLYFVS RNDGSHVFSS TLKAHNNAVN EFQRKRK
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