| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2235 |
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| Symbol | |
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| ID | 4279147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2679381 |
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| End bp | 2680619 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135032 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_750919 |
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| Protein GI | 114563406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTGGT GTGTGTTAAA TAGAGTGTGG TTATTATTTT TTATCATTGC AGCGTTGTCT
ATCACGATTC AATTAGTGAA TGGCAATGTC GATGTATTAA GCGAATCGGT GACGGCATTG
TTTGCCAGTG CTAAGTTAGC CGCTGACATA TCACTTGGCT TAATTGGTGT GTTAGCGTTA
TGGATGGGAT TGATGCAAGT CGGTGAAAAG GCCGGTGTGG TAGGGTTGTT TGCCCGCATA
TTTGAACCTT TATTGTCGAA GTTGATGCCA GAAGTTCCTC GTGGACATGT CGCCTATGGC
AGCATTAGCA TGAATCTTAC AGCTAACATG CTGGGACTGG ACAATGCAGC AACACCTTTA
GGCTTAAAAG CGATGCATGA TCTGCAATCT CTTAACCCTG TAAAATCAGT AGCAACCAAC
GCCCAAATTT TATTTTTAGT GTTAAATACT TCATCAGTTA CCTTAGTTCC TGTAACCGTA
TTTCTTTATC GTGCCCAACA AGGTGCGGCT AATCCTGCGG ATATCTTTTT ACCCATTTTA
TTAGCCACTA GTGTCTCCAC CGTTGTGGGA TTATTGGTTG TCGCGTTAGT GCAACGAATC
TCGTTAATCA ATAGTGTTAT TTTGGCTTAT GCTGCAACCA TTATGAGTGT ATTCATGGCT
GGGATCGCTT ATTTGGTGAC ATTATCCGCC GAGGCGATAG GCCAAGTGTC TATGGTGTTA
GGTAACGGTA TATTGTTGTT GCTGATTTTA AGTTTTATTC TAGTCGCGGG TTATCGCAAA
ATTGCTGTGT ATGACGAGTT TGTTGATGGC GCTAAACAGG GCTTTAGCCA AGCAATTCAG
CTAATCCCTT ATTTGCTGGC GATGTTATTA GCCATTGGAT TTCTTAGGGC TTCAGGGGCG
CTAGATTATG CCTTACAGCT GTTAGCTAGT GGCGTGAGTG CATTAGGCGC AGATACGCGC
TTTATTGATG CGATGCCAAC CGCGTTCATG AAACCTTTTA GCGGCTCTGG TGCGCGTGCG
ATGATGTTAG AAACGATGAG CCATCACGGA GTTGATTCTT TTGCGGGCCG CCTAGCGGCT
ATTTTACAAG GCAGTACCGA AACAACGTTT TATGTATTGG CTGTGTACTT TGGTTCAGTG
GGGATCCGTA ATGGACGTCA TGCACTGGGA TGTGGTTTAG CAGCAGATTT TGCAGGTATT
AGTGCCGCCA TCGGTGTGTG TTATTGGTTT TATGGTTAA
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| Protein sequence | MEWCVLNRVW LLFFIIAALS ITIQLVNGNV DVLSESVTAL FASAKLAADI SLGLIGVLAL
WMGLMQVGEK AGVVGLFARI FEPLLSKLMP EVPRGHVAYG SISMNLTANM LGLDNAATPL
GLKAMHDLQS LNPVKSVATN AQILFLVLNT SSVTLVPVTV FLYRAQQGAA NPADIFLPIL
LATSVSTVVG LLVVALVQRI SLINSVILAY AATIMSVFMA GIAYLVTLSA EAIGQVSMVL
GNGILLLLIL SFILVAGYRK IAVYDEFVDG AKQGFSQAIQ LIPYLLAMLL AIGFLRASGA
LDYALQLLAS GVSALGADTR FIDAMPTAFM KPFSGSGARA MMLETMSHHG VDSFAGRLAA
ILQGSTETTF YVLAVYFGSV GIRNGRHALG CGLAADFAGI SAAIGVCYWF YG
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